Gene Information

Name : hpaF (ECB_04227)
Accession : YP_003047388.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : -
Position : 4576060 - 4576440 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence :
ATGCCGCACTTTATCGTGGAATGTACTGAAAATATTCGTCAAGAAGCCCGCTTACCTGAGCTGTTTGCCAGTGTTAACAC
TGCACTGGCGGCGACGGGGATTTTTCCGCTTGGGGGAATACGTAGCCGGGCGCACTGGATCGATACCTGGCAAATGGCTG
ATGGCAAGCACGATTACGCCTTTGTGCATATGACGCTAAAAATCGGCAGCGGACGCAGTCTGGAAAGCCGTCAGGAAGTG
GGCGAAATGCTGTTTGATCTGATTAAAACGCACTTCGCCTCACTGATGGAGAGCCGTTACCTGGCGCTTTCATTTGAGAT
TGCAGAGCTGCACCCGACGTTGAATTTCAAACAGAACAACGTACACGCGTTGTTTAAATAA

Protein sequence :
MPHFIVECTENIRQEARLPELFASVNTALAATGIFPLGGIRSRAHWIDTWQMADGKHDYAFVHMTLKIGSGRSLESRQEV
GEMLFDLIKTHFASLMESRYLALSFEIAELHPTLNFKQNNVHALFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 4e-47 81