Gene Information

Name : ECB_03539 (ECB_03539)
Accession : YP_003046716.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : Aec78
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3794923 - 3795165 bp
Length : 243 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGCCGGGTTTACCCACTTTCAACTGGTAACCAGGAACAACATGAAATCATTAACCACGGAAACAGCACTGGATAT
TCTGATTGCGTGGCTGCAGGACAATATCGACTGCGAATCGGGAATTATCTTTGACAACGATGAGGATAAAACGGATTCGG
CAGCACTGCTGCCCTGCATTGAACAGGCGAGGGAGGATATCCATACCCTGCGCCAACTGCAGCTTCTGCAACAGAACCGG
TGA

Protein sequence :
MPAGFTHFQLVTRNNMKSLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREDIHTLRQLQLLQQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec78 AAW51761.1 Aec78 Not tested AGI-3 Protein 2e-26 100
unnamed CAI43905.1 hypothetical protein Not tested LEE Protein 4e-26 99
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 1e-25 99
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 7e-26 98
unnamed AAL57573.1 unknown Not tested LEE Protein 2e-25 98
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 4e-25 96
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 2e-25 96
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 5e-25 95
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 1e-24 95
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 2e-22 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECB_03539 YP_003046716.1 Aec78 VFG1684 Protein 5e-26 99
ECB_03539 YP_003046716.1 Aec78 VFG1532 Protein 2e-25 96
ECB_03539 YP_003046716.1 Aec78 VFG1622 Protein 8e-23 89