Gene Information

Name : ECB_03538 (ECB_03538)
Accession : YP_003046715.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3794468 - 3794956 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCGTTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGAGTTAATCTCAGTGAACTGATTAACAAGGTCTCTGAAAACGGTTATTTACTCCGCGTGGTCGATAAATCCGACCAAC
ACGCAACCAGTACACCACCACCGTTAACAACCCTTACCTGCATACGTTGCAGCACCGCACATATCACGGAAACGGACAAC
GCCTGGCTGTACTCGCTGTCACACCAGACTAATGACGACGGCGAATCAGAATGGATTCATTTTACAGGCAGCGGCTATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAGCGCCTGGGCCTGTCAAAAACGTTCCGTTGTCTGGTTG
TCACACTTACCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACTTTC
AACTGGTAA

Protein sequence :
MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYLLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDN
AWLYSLSHQTNDDGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRCLVVTLTRRYGVSLIHLDASAECLPGLPTF
NW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-65 100
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-65 100
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 1e-62 96
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 1e-62 96
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 1e-55 96
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 1e-58 92
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 6e-59 89
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-57 88
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 4e-59 88
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 1e-57 86
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 3e-56 86
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 4e-56 86
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 9e-57 86
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 9e-57 86
unnamed AAL08479.1 unknown Not tested SRL Protein 7e-56 86
unnamed AAC31487.1 L0008 Not tested LEE Protein 3e-56 86
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 4e-56 86
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 5e-56 84
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 4e-56 84
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 4e-55 84
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 2e-54 83
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 7e-53 82
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 2e-46 82
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-47 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECB_03538 YP_003046715.1 hypothetical protein VFG0664 Protein 4e-63 96
ECB_03538 YP_003046715.1 hypothetical protein VFG1070 Protein 3e-56 86
ECB_03538 YP_003046715.1 hypothetical protein VFG0787 Protein 1e-56 86
ECB_03538 YP_003046715.1 hypothetical protein VFG1621 Protein 2e-56 84
ECB_03538 YP_003046715.1 hypothetical protein VFG1683 Protein 2e-55 84
ECB_03538 YP_003046715.1 hypothetical protein VFG1531 Protein 3e-53 82