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Name : ECB_02836 (ECB_02836) Accession : YP_003046022.1 Strain : Escherichia coli REL606 Genome accession: NC_012967 Putative virulence/resistance : Virulence Product : type II secretion protein GspF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3034218 - 3035441 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGCATGATTGAGGCGGATTCCGCGCGTCA TGCCCGTCAATTGTTGCGTGGTAAAGACCTCATTCCCGTGCACATTGAAGCCCGGATGAATGCATCGGCAGGGGGGATGT TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGGCGGCAGATCTGGCGCTGTTCACACGCCAACTGGCAACATTAGTA CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTACACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGATTCTCTGT TTTGTTCGATGGTTGCTGCCGGTGAAAAATCCGGGCATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG CGACAGCGCCTGAAATCTCGCCTGCTGCAGGCCATGCTTTATCCGCTGGTATTGCTGGTGGTGGCAACGGGCGTAGTCAC TATTTTGCTGACGGCAGTGGTGCCGAAAATCATCGAACAGTTTGATCATCTCGGACACGCGCTGCCTGCCTCCACCCGCA CGCTCATCGCCATGAGCGACGCGTTACAGGCCAGCGGCGTGTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG CAACGGCTACTCAAAAATCCTGCGATGCGCCTGCGCTGGGATAAAACCTTGCTGCGTTTGCCCGTGACGGGGCGTGTTGC GCGCGGACTGAATACGGCGCGTTTTTCCCGCACATTAAGCATCCTCACCGCCAGCAGTGTTCCGCTGCTGGAAGGCATTC AGACCGCCGCCGCCGTGTCGGCAAATCGTTATGTCGAACAACAACTGCTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGTCTGCGCGCTGCGCTGGCGGAGTTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG CGAACTGGAAACCATGCTTGAGCAGGCCGCAGTCAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTAGGGC TGTTTGAACCGGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTCGAGCCGATGCTGCAA CTGAACAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKDLIPVHIEARMNASAGGMLQRRRHAHRRVAAADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRTLIAMSDALQASGVYWLAGLLGLLVLG QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-154 | 99 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-153 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECB_02836 | YP_003046022.1 | type II secretion protein GspF | VFG2049 | Protein | 2e-148 | 98 |
| ECB_02836 | YP_003046022.1 | type II secretion protein GspF | VFG0181 | Protein | 1e-68 | 47 |
