Gene Information

Name : ECB_02832 (ECB_02832)
Accession : YP_003046018.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : type II secretion protein GspJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3032209 - 3032772 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
GTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAGCGCCGT
CGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACACAAATGATGCCGC
GTCCGGTAAGAGACGATCAGGGCCAGCGTGAACCAGCGTTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGG
ATGCGCTTTGTGCGCGGCGGTGTGGTTAACCCGTTGATGCGTCTGCCACGCAGTAATCTGCTCACCGTCGGTTACCGCAT
TCATGACGGCTATCTCGAACGGTTAGCCTGGCCGCTGACCGACGCAGCAGGCAGCGTGAAGCCGACAATGCAAAAGTTGA
TTCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCGATCCCT
GTGGCGGTACGCATAACCCTGCATTCGCCGCAATGGGGCGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATC
ATGA

Protein sequence :
MAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRDDQGQREPALLAGAGVLASESEG
MRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQAIP
VAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-82 98
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-82 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECB_02832 YP_003046018.1 type II secretion protein GspJ VFG2053 Protein 2e-83 98