Gene Information

Name : ECB_02828 (ECB_02828)
Accession : YP_003046015.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : Polysialic acid transport protein kpsM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3027685 - 3028461 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAGAAGTGGATTTGAAGTCCAGAAAGTCACCGTAGAGGCATTATTTCTACGAGAAATACGAACACGCTTTGGTAA
GTTCCGTCTGGGATATTTGTGGGCGATTCTCGAACCCTCTGCGCATTTGCTGATACTGTTGGGCATTTTTGGTTACATTA
TGCACCGCACGATGCCAGACATCTCATTCCCGGTGTTTTTACTTAATGGCCTGATTCCCTTTTTTATCTTTAGCAGTATC
AGCAATCGTTCTGTAGGTGCTATTGAAGCGAATCAGGGGTTGTTTAATTATCGACCAGTAAAACCCATCGATACGATCAT
TGCACGCGCACTGCTTGAGACACTGATTTACGTTGCTGTTTATATTCTGCTTATGCTCATTGTCTGGATGGCAGGCGAAT
ATTTCGAGATAACAAATTTTTTACAACTTGTGGCTACCTGGAGCCTGCTGATCATTCTTTCATGTGGCGTCGGCTTAATA
TTCATGGTCGTTGGTAAAACCTTCCCCGAAATGCAAAAGGTTCTGCCGATACTGCTTAAGCCGCTGTATTTCATCTCCTG
CATCATGTTCCCTCTACACTCGATTCCAAAGCAATACTGGTCATATCTACTCTGGAACCCATTAGTACATGTGGTGGAGC
TAAGCCGCGAGGCTGTTATGCCTGGCTATATCAGCGAAGGCGTAAGTCTGAACTACCTGGCAATGTTCACATTGATAACT
CTGTTCATTGGTCTGGCTTTATACCGAACTCGTGAGGAGGCAATGCTGACATCATGA

Protein sequence :
MARSGFEVQKVTVEALFLREIRTRFGKFRLGYLWAILEPSAHLLILLGIFGYIMHRTMPDISFPVFLLNGLIPFFIFSSI
SNRSVGAIEANQGLFNYRPVKPIDTIIARALLETLIYVAVYILLMLIVWMAGEYFEITNFLQLVATWSLLIILSCGVGLI
FMVVGKTFPEMQKVLPILLKPLYFISCIMFPLHSIPKQYWSYLLWNPLVHVVELSREAVMPGYISEGVSLNYLAMFTLIT
LFIGLALYRTREEAMLTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsM YP_854397.1 polysialic acid transport protein KpsM Not tested PAI I APEC-O1 Protein 1e-112 98
kpsM CAE85224.1 KpsM protein Virulence PAI V 536 Protein 1e-87 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECB_02828 YP_003046015.1 Polysialic acid transport protein kpsM VFG1450 Protein 5e-113 98