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Name : ECB_02818 (ECB_02818) Accession : YP_003046005.1 Strain : Escherichia coli REL606 Genome accession: NC_012967 Putative virulence/resistance : Virulence Product : Capsule polysaccharide export protein KpsC Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 3017003 - 3019030 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTTCTCGTCCGGTATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCGCAAGAAGTTGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTAAA GGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTTCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCATCCGGATGTCCTGGAAGGAAAGAAAACAGGTTATTTCGCTGATCTGTGCGCCACGCAAC GAGTACGTTTGATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACCTCCCAA TATGGCTTTGAAGCCTTGCTGGCAGGAAAACCAGTAACATGCTTCGGCCAGCCCTGGTATGCAGGTTGGGGCTTAACCGA CGATCGTCATCCACAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCTGCAAACGGGAGAAGTAAGCGATCTATTTACCGTGCTGCAATGGCTGCAATTACAA CGTCGACATCTGCAACAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCAGCGATCCTGAAACCTTT CTTGCAAACGGCAACAAACCGGCTGAGTTTTTCACGTCGTTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAACGAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC GGACTTGGCTCTGACCTGCTGCCGCCGCTATCGTTGGTGCTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG CGACCTGGAAGTGCTGATTAATCACAGCCAGTTAACGCTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGGCTAG TTGAAAGTAAACTGAGCAAGTACAACTTGGGGGCCGATTTCTCTCTGCCTGCCGAAGCCAAAGATAAAAAAATCATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCTATTAAAACTGGCACTGTGTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTGCGCGAGCGTAATCCGCACGCCTACATTATTTATAAACCGCACCCGGATGTATTAGTGGGGAATCGTAAGGGCAATA TTCCGGCTAAATTGATCGCTGAACTTGCCGACTATCAGGCACTGGACGCAGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCAAGTTCATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGCTGATGAACATCACTGCCCGCGCCGCGAGCGCAGATTAACGATAGCAGACTTGATCT ATCAGGCGTTGATTGTTTATCCAACCTATATCCACCCAATACGGCTACAACCTATTACTGTTGAAGAGGCGGCGGAATAT TTGATCCAGACGCCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGGCGAGTAATACGCTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIFSSGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCGIYYDASKPSALEKLVKDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLCATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDLQTGEVSDLFTVLQWLQLQ RRHLQQRNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLINHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAKLIAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTADEHHCPRRERRLTIADLIYQALIVYPTYIHPIRLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 97 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 97 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-126 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECB_02818 | YP_003046005.1 | Capsule polysaccharide export protein KpsC | VFG0259 | Protein | 9e-127 | 50 |
| ECB_02818 | YP_003046005.1 | Capsule polysaccharide export protein KpsC | VFG0692 | Protein | 1e-115 | 48 |
| ECB_02818 | YP_003046005.1 | Capsule polysaccharide export protein KpsC | VFG0704 | Protein | 8e-103 | 47 |
