Gene Information

Name : ECB_02817 (ECB_02817)
Accession : YP_003046004.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 3016266 - 3017006 bp
Length : 741 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGAGCAAAGCTGTTATTGTCATCCCGGCTCGTTATGGCTCATCGCGTCTGCCGGGTAAGCCGCTACTCGATATTGTCGG
CAAACCGATGATCCAGCATGTTTACGAGTGTGCGTTACAGGTGGCGGGCGTTGCGGAAGTTTGGGTGGCAACAGACGATC
CGCGTGTTGAACAGGCCGTGCAGGCATTTGGCGGGAAAGCCATCATGACGCGCAACGATCATGAATCCGGCACCGATCGG
CTGGTCGAGGTGATGCATAAAGTCGAGGCAGATATCTACATTAACCTGCAGGGCGACGAACCAATGATTCGCCCGCGGGA
TGTAGAAACGCTGTTACAAGGAATGCGTGATGACCCCGCGTTGCCAGTGGCAACGCTATGCCACGCGATTTCTGCCGAAG
AAGCGACCGAGCCAAGCACGGTAAAAGTGGTGGTAAATACCCGCCAGGATGCGCTTTATTTCAGCCGTTCGCCTATTCCG
TATCCGTGTAATGCTGAAAAAGCGCGCTACCTGAAACACGTTGGTATTTACGCTTATCGTCGCGATGTGCTGCAAAACTA
CAGCCAGTTACCGGAGTCCATGCAGGAGCAGGCAGAATCACTGGAGCAGCTGCGGTTGATGAGCGCGGGGATCAACATCC
GCACATTTGAGGTTGCCGCAACCGGTCCGGGCGTCGACACCCCAGCATGCCTGGAAAAAGTGCGCGCCCTGATGGCACAG
GAACTGGCTGAAAACGCATGA

Protein sequence :
MSKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYECALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDR
LVEVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIP
YPCNAEKARYLKHVGIYAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRALMAQ
ELAENA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-112 99
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-110 98
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-110 98