Gene Information

Name : yafZ (ECB_02803)
Accession : YP_003045990.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3005991 - 3006809 bp
Length : 819 bp
Strand : +
Note : similar to b0252

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATGCGAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCACTA
TGTACCCGGTATTTTTGGGGAAGACCGGCATACCTCCCGCAGTGAACGCTATACGTATATCCCCACCATCACCGTGCTGG
AAAGTCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGTCTGCGGCGGGCCAGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGAGAAAGTTATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCAGGTCGCAGCGCTAAAGGAAAA
CGTATCCATACCCGTGCCATTCACAGCATTGACACTGACATTAAGCTCAACCGCGCATTGTGGGTGATGGCGGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDRHTSRSERYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAREINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-118 98
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-118 98
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-118 98
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 6e-118 96
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-117 96
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-117 96
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-113 94
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-113 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-113 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 4e-115 94
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-111 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-111 91
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-108 90
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-109 90
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-110 90
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-72 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yafZ YP_003045990.1 hypothetical protein VFG0658 Protein 1e-117 96
yafZ YP_003045990.1 hypothetical protein VFG1676 Protein 3e-115 94
yafZ YP_003045990.1 hypothetical protein VFG1615 Protein 1e-108 90
yafZ YP_003045990.1 hypothetical protein VFG1526 Protein 1e-109 90