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Name : flu (ECB_02800) Accession : YP_003045987.1 Strain : Escherichia coli REL606 Genome accession: NC_012967 Putative virulence/resistance : Virulence Product : antigen 43 (Ag43) phase-variable biofilm formation autotransporter Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3468 EC number : - Position : 2999564 - 3002410 bp Length : 2847 bp Strand : + Note : similar to b2000 DNA sequence : ATGAAACGACATCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGC CCGCTCACGGGGAAAACGCGCCGGTGTGGCGGTTGCGCTGTCTCTTGCTGCTGTTACGTCAGTCCCGGCACTGGCTGCTG ACACGGTCGTACAGGCGGGAGAAACCGTGAACGGCGGAACACTGACAAATCATGACAACCAGATTGTCTTCGGTGCGACC AACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGATAACGAGGCCAATACCGGTGGGCAATGGGTACAGGATGG CGGCACAGCCAGTAATACCACCATCAGCAGCGGCGGGCTCCAGTTTGTAGGTGCCGGGGGAAAGGCTACAGACACAATAA TCAATGAAGGAGGCGGACAAAGTCTGAAGGGACTGGCACTGAACACCACGCTGAATGGTGGCGAGCAGTGGATGCATGAA GGTGCGATAGCCACAGGAACCGTCATTAATGATAAGGGCTGGCAGGTCGTCAAACCCGGCGCAGTGGCAACAGACACCGT TGTGAATACCGGCGCAGAAGGAGGACCGGATGTAGAAAATGGTGATACCGGGCAGTTTGTTCGCGGAAATGCCGTACGTA CCACCATCAATGAAAATGGTCGTCAGATTGTGGCTGCTGAAGGAACAGCAAATACCACTGTGGTTTATGCCGGCGGCGAC CAGACGGTACACGGGCATGCGCTGGATACCACACTGAATGGCGGTTACCAGTATGTGCACAACGGAGGCACAGCCTCTGA CACGGTTGTAAACAGTGACGGCTGGCAGATTATCAAGGAAGGTGGCCTGGCAAATTTCACCACCGTTAACCAGAAAGGCA AACTGCAGGTGAACGCCGGTGGTACAGCCACGAATGTCACCCTGAAGCAGGGCGGCGTACTGGTCACCAGTACGGCGGCA ACCGTCACCGGCAGCAACCGTCTGGGCAATTTCGCGGTGGAAAACGGTAAGGCTGACGGTGTTGTTCTGGAATCCGGCGG TCGTCTGGATGTACTGGAGAGCCATTCAGCACAGAATACCCTGGTGGATGACGGCGGTACCCTGGCAGTGTCTGCCGGTG GGCAGGCGACAGGTGTCACCATGACATCTGGTGGTGCCCTGATTGCAGACAGTGGTGCCACTGTTGAGGGGACCAATGCC AGCGGTAAGTTCAGTATTGATGGCATATCTGGTCAGGCCAGCGGCCTGCTGCTGGAAAATGGCGGCAGCTTTACGGTTAA TGTCGGGGGACAGGCCAGCAACACCACTGTCGGACATCGTGGAACACTGACGCTGGCTGCCGGGGGAAGTCTGAGTGGCA GAACACAGCTCAGTAAAGGCGCCAGCATGGTACTGAATGGCGATGTGGTCAGTACCGGCGATATTGTTAACGCAGGGGAG ATTCGCTTTGATAATCAGACGACACAGGATGCTGCGCTGAGCCGTGCTGTTGCAAAAAGTAACTCCCCGGTAACGTTCCA TAAACTGACCACCACGAACCTCACCGGCCAGGGCGGCACCATCAATATGCGTGTCAGCCTTGATGGCAGCAATGCCTCTG ACCAGCTGGTGATTAATGGTGGTCAGGCAACCGGCAAAACCTGGCTTGCGTTTACAAATGTCGGAAATAGTAACCTCGGG GTGGCAACCTCCGGACAGGGTATCCGGGTTGTGGATGCACAGAATGGCGCCACCACAGAAGAAGGTGCGTTTGCCCTGAG TCGCCCGCTTCAGGCCGGCGCCTTTAACTACACCCTGAACCGTGACAGCGATGAAGACTGGTACCTGCGCAGTGAAAATG CTTATCGTGCTGAAGTCCCCCTGTATACATCCATGCTGACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGC AGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAA CGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTCAGAA CAGAGGTTGCCGGTATGTCTGTGACAGCGGGGGTATATGGTGCTGCCGGCCATTCTTCCGTTGATGTTAAGGATGATGAC GGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCAGTCTGGGCGGATACCTGAATCTGACACACACGTCCTCCGGCCT GTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCT GGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTAC ACCTGGCAGGGGCTCTCCCTGGATGACGGCCAGGATAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTACACAACATGT GCGTGCCGGCTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGACACTCTGCGCGACA GTACAAAACACCGTGTGAGTGAACTGCCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACTTTCAGCTCCCGGGGT GACATGAGCATGGGTACAGCCGCCGCCGGCAGTAACATGACGTTCTCACCGTCCCGGAATGGCACGTCACTGGACCTGCA GGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCA GCGCTGAAGGCTATAACGGTCAGGCCACGCTGAATGTGACCTTCTGA Protein sequence : MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAGETVNGGTLTNHDNQIVFGAT NGMTISTGLEYGPDNEANTGGQWVQDGGTASNTTISSGGLQFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHE GAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPDVENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLANFTTVNQKGKLQVNAGGTATNVTLKQGGVLVTSTAA TVTGSNRLGNFAVENGKADGVVLESGGRLDVLESHSAQNTLVDDGGTLAVSAGGQATGVTMTSGGALIADSGATVEGTNA SGKFSIDGISGQASGLLLENGGSFTVNVGGQASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IRFDNQTTQDAALSRAVAKSNSPVTFHKLTTTNLTGQGGTINMRVSLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLG VATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSR SHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQY TWQGLSLDDGQDNAGYVKFGHGSTQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRG DMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 94 |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 93 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 89 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 89 |
| aec67 | AAW51750.1 | Aec67 | Not tested | AGI-3 | Protein | 0.0 | 65 |
| S3195 | NP_838479.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 64 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 60 |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 59 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 58 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 58 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| flu | YP_003045987.1 | antigen 43 (Ag43) phase-variable biofilm formation autotransporter | VFG1063 | Protein | 0.0 | 94 |
| flu | YP_003045987.1 | antigen 43 (Ag43) phase-variable biofilm formation autotransporter | VFG1675 | Protein | 0.0 | 59 |
| flu | YP_003045987.1 | antigen 43 (Ag43) phase-variable biofilm formation autotransporter | VFG0655 | Protein | 0.0 | 58 |
