Gene Information

Name : gabD (ECB_02517)
Accession : YP_003045706.1
Strain : Escherichia coli REL606
Genome accession: NC_012967
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 2685953 - 2687401 bp
Length : 1449 bp
Strand : +
Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent

DNA sequence :
ATGAAACTTAACGACAGTAAATTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT
CATCGATGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA
TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC
AATTTGTTGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTAGAACAGGGCAAACCGCTGGCTGAAGCGAAAGG
CGAAATTAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCTGAAGAAGGCAAACGCATTTATGGCGACACCATTCCTGGTC
ATCAGGCCGATAAGCGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCAGCTATCACGCCGTGGAACTTCCCGGCG
GCGATGATTACCCGCAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACCATGGTGCTGAAGCCTGCCAGTCAGACGCCGTT
CTCTGCGCTGGCGCTGGCGGAGCTGGCGATTCGCGCGGGCATTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGG
GCGCGGTGGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAG
TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA
TGCCGACCTCGACAAAGCCGTGGAAGGTGCGCTGTCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC
GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAATTGCACATCGGCGAC
GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC
GCTGGAGAAAGGTGCGCGTGTGGTTTGCGGCGGTAAAGCGGATGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGG
TGGACGTTCCAGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCACTGTTCCGTTTTAAAGATGAA
GCCGATGTGATTGCGCAAGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT
CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGCATCATTTCCAATGAAGTGGCCCCGTTCGGCG
GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC
GGTCTTTAA

Protein sequence :
MKLNDSKLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF
NLLMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA
AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALSSKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD
GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKADERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE
ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-157 66