Gene Information

Name : phbE (PAU_00893)
Accession : YP_003039730.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : enterobactin synthetase component e
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : -
Position : 1006915 - 1008558 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence : 
ATGATAGTTGAATTTAATCGTTGGCCGAAAGCGTTGGAACAACGCTATCGTCAGCTTGGTTATTGGATAGATCTCCCTCT
TTGTGACATTTTTACCCGTCAGTCAGACAACGGAAAAATTGCACTTATCTGTGGAGAACGTCAGTTCAGCTATGCTGAAC
TTAATCTGCTAGTGGATAGTTTAGCCGCAGCACTACAACAACGAGGCGTTAAACGAGGACAAACCGCCTTAGTTCAATTA
GGCAATGAGGCTGAGTTTTATATTGTTTTCTTTGCGTTATTGCGACTTGGCGTAGTTCCGATTAATGCGGTATTTAGCCA
TCAGCGTAGTGAACTTTGTGCTTATGCTGATCAGATTAACCCCGCATTATTAATTGCCGATCGCAACCATTCCTTATTTA
GCGACGACGATTTTATTGATGAACTCAGAATCCGTATCCCGTCTTTATGTCACGTTGTCTTACGTGGTGATAATGACAGT
ATTCTGGATGTTGAGACTCTGTTGGCACAAGGTGCTGGCGACTTTGTCGCTAATCCAACACCTGCTGATGAAGTTGCATT
TTTCCAATTGTCGGGAGGAAGTACGGGAACACCTAAACTTATTCCCCGAACGCATAATGATTATTACTACAGTATTCGCG
CTAGTGCGGAAATTTGTCAGTTTAATGCTGAAACTCGCTATTTATGTGCACTTCCTGCTGCGCATAACTTTCCTATGAGT
TCACCGGGAGCGTTAGGGGCATTTTACTGCGGAGGACAGGTTATTTTAGCGCATAACCCCGGCGCTGATTGTTGTTTTCC
GCTGATCCAGCAACATCGGGTGAATGCTGTTGCACTGGTACCGCCAGCAGTCAGTGTGTGGCTTGAAGCGATAGCTCTTG
GTGGTAACTGCGACGCACTAAAAAGCTTGCGATTGCTACAGGTCGGTGGGGCAAGGTTAAGCGAGAGCCTGGCCAGACGT
ATTCCAAAAGAAATGGGATGTCAATTACAACAAGTTTTTGGTATGGCTGAAGGATTAGTGAACTATACCCGGCTGGATGA
TGACGAACAGCATATTTTTATGACCCAAGGCCGCCCTATAAGTCCGGATGATGAAGTTTGGGTTGCTGATAACGATGGTA
ATCCTGTTCCTCATGGTATTGCTGGCCGATTGATGACTCAGGGGCCTTATACTTTCCGTGGATATTACCGCAGTCCACAG
CATAATCAGCAATGCTTTGATAGTAATGGATTCTATTGTTCTGGTGATCTTGTCATCATGACACCTGATGGTTATTTACA
AGTAGTAGGACGTGAAAAAGATCAAATCAATCGCGGTGGGGAAAAAATTGCTACAGAGGAAGTTGAAAATCTATTACTTC
AGCATCCTGATGTCATTTATGCCGCGCTTGTCGCTGTTCCTGATGAGTTAATGGGGGAAAAAAGCTGTGCTTTTGTCGTA
TCACGAAAACCGATAAAAGCCGTAGCCTTACGACGTTATCTACGTGAACAGGGAATAGCAGATTATAAATTACCTGACCG
GTTTGAATCTGTCCCTTCACTGCCATTGACACATATTGGAAAAATAGACAAGCAACAATTACGTCAATTTGTTAAGCAAT
TTGTTCAGTCATCACTTGTTGGAGAAAGAAATGAGCATTCCTAA

Protein sequence : 
MIVEFNRWPKALEQRYRQLGYWIDLPLCDIFTRQSDNGKIALICGERQFSYAELNLLVDSLAAALQQRGVKRGQTALVQL
GNEAEFYIVFFALLRLGVVPINAVFSHQRSELCAYADQINPALLIADRNHSLFSDDDFIDELRIRIPSLCHVVLRGDNDS
ILDVETLLAQGAGDFVANPTPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSIRASAEICQFNAETRYLCALPAAHNFPMS
SPGALGAFYCGGQVILAHNPGADCCFPLIQQHRVNAVALVPPAVSVWLEAIALGGNCDALKSLRLLQVGGARLSESLARR
IPKEMGCQLQQVFGMAEGLVNYTRLDDDEQHIFMTQGRPISPDDEVWVADNDGNPVPHGIAGRLMTQGPYTFRGYYRSPQ
HNQQCFDSNGFYCSGDLVIMTPDGYLQVVGREKDQINRGGEKIATEEVENLLLQHPDVIYAALVAVPDELMGEKSCAFVV
SRKPIKAVALRRYLREQGIADYKLPDRFESVPSLPLTHIGKIDKQQLRQFVKQFVQSSLVGERNEHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 7e-88 43
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-87 43
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-89 43
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-89 43
ybtE CAA21394.1 - Virulence HPI Protein 2e-89 43
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 1e-89 43
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 2e-89 43
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-89 43
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 2e-89 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phbE YP_003039730.1 enterobactin synthetase component e VFG0932 Protein 3e-176 66
phbE YP_003039730.1 enterobactin synthetase component e VFG0168 Protein 7e-106 45