Gene Information

Name : phuC (PAU_00891)
Accession : YP_003039728.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : ferric vibriobactin abc transporter, atp-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1004608 - 1005459 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence : 
GTGAGAGAGTTGATGACAACGTTGACGCCAAAACATGATAGCCAAAGTGTTTTATTACCTTGTCGTTTGAGTGTGGAAGA
ATTGCGCTTGGGTTACGGTGAACATATCGTCTGTGATGAACTGAATCTGCGTATTCCTGATAGTCGTTTTACCGTGATTA
TCGGCCCTAATGGCTGTGGTAAATCTACGCTGTTAAGAAGTTTATGCCGCCTGCTACGTCCGGAATATGGCAGAGTTTGC
CTTGATGGCCACGATATTCACACTATACCGACACGCGCTTTGGCTCGTCAGCTGGGATTATTACCGCAAAGTGTACAAGC
ACCTCAGGGGATCACAGTTGTTGATTTAGTGGCACGCGGGCGTTTTCCCCATCAGCGGTTATTGCGTCAATGGAGTCATG
AGGATTATGAAGCGGTGCGCCAGGCAATGGATATGACCGGTATAACACAGCTTGCTGAATGTGTTGTTGACGAGCTGTCA
GGCGGGCAGCGCCAACGGGTTTGGATTGCCATGGTGCTGGCTCAGCAAACGCCATTGTTATTGCTTGATGAACCGACAAC
CTATCTTGATATTGCTCATCAAATTGAGTTGCTTGAGTTGTTTTGTAGCCTTAATCAAGAAGCTGGATATACACTTATCG
CCGTACTTCATGATTTAAATCAGGCTTGCCGGTATGCAGATCACTTGATTGTGATGGCTGGAGGGCGGATTGTGGTGGAA
GGGGCTCCTGGTGAGATTATGACGACAACATTGGTTTCTGAGGTTTTTGGGCTCGATTGTGTCATTATTGATGATCCCAT
CAGTCATACTCCTTTAATTATCCCGCAAAGACGGCGTTTTATCGGGGGATAG

Protein sequence : 
MRELMTTLTPKHDSQSVLLPCRLSVEELRLGYGEHIVCDELNLRIPDSRFTVIIGPNGCGKSTLLRSLCRLLRPEYGRVC
LDGHDIHTIPTRALARQLGLLPQSVQAPQGITVVDLVARGRFPHQRLLRQWSHEDYEAVRQAMDMTGITQLAECVVDELS
GGQRQRVWIAMVLAQQTPLLLLDEPTTYLDIAHQIELLELFCSLNQEAGYTLIAVLHDLNQACRYADHLIVMAGGRIVVE
GAPGEIMTTTLVSEVFGLDCVIIDDPISHTPLIIPQRRRFIGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-57 52
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-60 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-60 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-60 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-60 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-47 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-55 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-55 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-44 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phuC YP_003039728.1 ferric vibriobactin abc transporter, atp-binding protein BAC0164 Protein 4e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phuC YP_003039728.1 ferric vibriobactin abc transporter, atp-binding protein VFG0925 Protein 7e-73 61
phuC YP_003039728.1 ferric vibriobactin abc transporter, atp-binding protein VFG1042 Protein 4e-47 50