Gene Information

Name : lspA (PAU_00556)
Accession : YP_003039393.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 627846 - 628349 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence :
ATGAATAGACCCATTTGCTCCACTGGCCTTCGCTGGTTTTGGTTAGTTGTTGTGGTATTGATTTTGGATCTGGGTAGTAA
ACAGTTAGTGCTTAAGCATTTTCATCTGTATGAATCCGTTCCACTGATACCTTATTTCAATCTGGCCTATGCCCAGAATC
TGGGAGCGGCTTTTAGTTTTCTTGCAGATAAAGATGGTTGGCAGCGCTGGTTCTTTGCATTAGTTGCTGTTGGTATTTCA
ATTGTGTTGACGGTAATGATGTATCGTTCCAGTGCAAAGAAAAAGCTAAGCAATATTGCTTATGCTCTGATTGTCGGTGG
AGCATTGGGTAATCTGTTTGATCGGCTGGTTCATGGCTTTGTTATTGATTTTATCGATTTTTATGTTGGCGACTGGCACT
GGCCAACCTTTAATATTGCTGATATGGCGATATGCATTGGAGCTGCGTTAGTGATTATTGAGAGTTTTTTCAGTCAAGAT
GAAAAAACGATTAATGCAGGATAA

Protein sequence :
MNRPICSTGLRWFWLVVVVLILDLGSKQLVLKHFHLYESVPLIPYFNLAYAQNLGAAFSFLADKDGWQRWFFALVAVGIS
IVLTVMMYRSSAKKKLSNIAYALIVGGALGNLFDRLVHGFVIDFIDFYVGDWHWPTFNIADMAICIGAALVIIESFFSQD
EKTINAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-24 45
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 4e-19 45
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 4e-19 45
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 6e-19 45
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-19 45
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 4e-19 45