Gene Information

Name : rph (PAU_04378)
Accession : YP_003043206.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : ribonuclease ph
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 5035544 - 5036257 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCCAGCAGGAAGAGCGGCAGAGCAAGTGCGTCCTATCACTATAACTCGTCATTACACTAAACACGCGGAAGGCTC
GGTTCTGGTGGAGTTTGGGGATACCAAGGTGTTATGTAATGCATCCGTTGAAGAGGGCGTTCCCCGTTTCTTGAAAGGTC
AAGGACAAGGTTGGATTACGGCTGAGTATGGCATGTTACCGCGTTCTACTCATAGCCGGAATGCTCGTGAAGCAGCGAGA
GGCAAACAAGGCGGGCGTACTATGGAAATCCAGCGTCTGATTGCCCGTTCACTGCGTGCCGCTGTTGATCTGAAAAAATT
GGGTGAATATACCGTTACTCTGGATTGTGATGTTATTCAGGCTGATGGTGGTACCCGTACTGCTTCTATTACTGGTGCTT
GTGTAGCGCTGGTTGATGCACTGAATAAAATGGTTGAAGCGGGCAAATTGAAAGAGAATCCGCTGAAATCAATGGTTGCT
GCGGTTTCTGTTGGTATTGTGGATAACGAAGGTCGTTGTGATTTGGAATATGTGGAAGATTCAGCGGCTGAAACTGATAT
GAACGTTGTGATGATGGAAGATGGTCGGATGATTGAAGTGCAAGGCACTGCGGAAGGAGAGCCATTCAGTCATGATGAAT
TGTTGTCCTTATTGTCCCTTGCTAAAGGGGGACTAGAGACCATTTTTGCAGCGCAGAGAACTGCGTTAAAATAA

Protein sequence :
MRPAGRAAEQVRPITITRHYTKHAEGSVLVEFGDTKVLCNASVEEGVPRFLKGQGQGWITAEYGMLPRSTHSRNAREAAR
GKQGGRTMEIQRLIARSLRAAVDLKKLGEYTVTLDCDVIQADGGTRTASITGACVALVDALNKMVEAGKLKENPLKSMVA
AVSVGIVDNEGRCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHDELLSLLSLAKGGLETIFAAQRTALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-59 58