Gene Information

Name : PAU_04341 (PAU_04341)
Accession : YP_003043169.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 5000988 - 5001551 bp
Length : 564 bp
Strand : +
Note : -

DNA sequence :
ATGACCACTTTGATAATTCGTATATTTGATATTATATTTTCCTTAACAGGATTGATTATAACTTCCCCGATCTTATTTAT
CTTAACTATTATCGGATTATTTGACACAGGCTCACCTTTATTCCGACAAACACGTGTGGGGCGATTTCAAAAACCGTTTA
CTTTGGTCAAGTTACGTACTATGAAAATAGATACAGCTTCTGTTGCAAGTCATTTAGCCAATTCTTCTTCTATTACCAAA
TTTGGTAGTTTCTTACGTAAAAGTAAGTTAGACGAGCTGCCACAATTATGGAATGTGTTGAAAGGGGAAATGAGCCTTGT
CGGACCTCGTCCTTGTCTCTTTAATCAAGAAGAACTAATCACTGAAAGAAAACTGCTTAATGTATTTAATGTGAAGCCAG
GAATTACAGGGTTAGCACAAGTCAACACCGTAGATATGTCTACACCAAAATTATTAGCTGAAATGGATGCTCATATGATT
AATTCACTCACATTAACTGATTATTTCAAATACATTATACAAACGGTTGCTGGTAAAGGCTCTGGCGATAGGGTCAAATA
TTAA

Protein sequence :
MTTLIIRIFDIIFSLTGLIITSPILFILTIIGLFDTGSPLFRQTRVGRFQKPFTLVKLRTMKIDTASVASHLANSSSITK
FGSFLRKSKLDELPQLWNVLKGEMSLVGPRPCLFNQEELITERKLLNVFNVKPGITGLAQVNTVDMSTPKLLAEMDAHMI
NSLTLTDYFKYIIQTVAGKGSGDRVKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-24 49
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_04341 YP_003043169.1 sugar transferase VFG1309 Protein 3e-27 52