Gene Information

Name : wbpP (PAU_04338)
Accession : YP_003043166.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : putative nad-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 4.2.1.-
Position : 4997807 - 4998844 bp
Length : 1038 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTCATATGAACAATTAAAGATTCAATTACAACAAAAACCAGCAACTTGGCTGATTACAGGTGTTGCTGGGTTTAT
AGGAAGTAATTTATTAGAAACTTTACTCAAATTAAATCAAAATGTTATTGGGTTAGATAACTTTGCTACTGGCCATAAAC
ATAACCTTGAAATTATTAAAAACCTTATTACACCAGAACAATGGCAAAAATTTCATTTTATTGAGGGAGATATACGAAAC
CTAGATGATTGCCAAAAGGCAAGTGTCGGTGTTGATTATATTCTTCATCAGGCAGCCCTAGGATCTGTGCCTCGTTCAAT
AGAAGATCCAATTACAAGCAATGCTACCAACATTAGTGGCTTTTTAAACATGCTAGTAGCCGCTCGTGATGCAAGAGCTA
AACGTTTTGTTTATGCCGCTAGCAGCTCTACTTATGGAGATCATCCTGAACTTCCAAAAATAGAAGAGCGCATTGGAAAC
CCACTATCTCCTTATGCAGTTACAAAATATGCCAATGAATTATATGCTAGTGTTTTTGCAAGGACTTATAATTTACAAAG
CATAGGCTTACGCTATTTCAATGTATTTGGCCCACGGCAGGATCCCAATGGATCTTATGCTGCAGTAATTCCAAAATGGA
CAGCCACAATGCTTGCAGGTGAACAAATCTATATAAACGGGGATGGAAAAACTAGCCGTGATTTTTGTTTTGTCGCAAAT
GCTGTTCAAGCCAATATATTAGCTGCCACAACCATAAATCATAATGCAATAAATCAAGTCTACAATGTTGCAATTAGTCA
ACAGACAACTCTCAATGAACTTTTTGAGATGATTAAAAGTGAACTGGTCGCCAATAATTTTAATGATGATAATATATTAC
CTGCTATACATCGTGACTTCCGAAAAGGAGATGTAAGACATTCATTAGCAGATATTAATAAAGCGTCAAATCTTCTTGGC
TATAAACCAACACATACAATACGGCAAGGAATAAAATTAGCTACTCAATGGTATTTGAAAGAATATAAAAATAATTAG

Protein sequence : 
MISYEQLKIQLQQKPATWLITGVAGFIGSNLLETLLKLNQNVIGLDNFATGHKHNLEIIKNLITPEQWQKFHFIEGDIRN
LDDCQKASVGVDYILHQAALGSVPRSIEDPITSNATNISGFLNMLVAARDARAKRFVYAASSSTYGDHPELPKIEERIGN
PLSPYAVTKYANELYASVFARTYNLQSIGLRYFNVFGPRQDPNGSYAAVIPKWTATMLAGEQIYINGDGKTSRDFCFVAN
AVQANILAATTINHNAINQVYNVAISQQTTLNELFEMIKSELVANNFNDDNILPAIHRDFRKGDVRHSLADINKASNLLG
YKPTHTIRQGIKLATQWYLKEYKNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-105 61
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-105 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP YP_003043166.1 putative nad-dependent epimerase/dehydratase VFG0430 Protein 8e-106 61