Gene Information

Name : PAU_04296 (PAU_04296)
Accession : YP_003043124.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : probable capsid portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 4956358 - 4957341 bp
Length : 984 bp
Strand : +
Note : -

DNA sequence : 
TTGAAGCATTTAGCATTTACTTTTGGTGACCCGATCCCCGTCCTTGACCGGCGCGAGGTGTTTGATTATCTGGAATGTGT
GCTGGTCGATAGTTGGTATGAACCCCCGATTAGTTTTAACGGGCTGGCGCTGTTGTTTCGCTCTGCACCGCACCACAGTA
GCGCGGTGTATGTGAAACGCAATATTTTAACCAGCACGTTTATCCCGCATAGCTTACTGAGTCGGCAGGCGTTCGACTCA
TGGGCGCTGGACTTTATGCTGTTTGGAAATGCCTACCTTGAACAGCGCAAGAATCGCCTCGGCCAGCCTTTAAAGCTGAA
TCACTGCCCGGCCAAGTTCACCCGACGCGGTGAAGATTTGGAAACCTACTGGTTTGTGAAATATGGCTACAACAGCCAGC
CATACCCGTTCCCAACGGGGCAGGTTTTTCATTTGATTGAACCCGATATTAATCAGGAACTCTACGGCCTGCCGGAATAT
CTAGCCGCACTGCCGTCGGCATTACTGAATGAATCGGCTACGCTTTTTCGCCGCAAGTATTACCTGAACGGTTCCCATGC
AGGTTATATCCTGTATATCAGCGACGCGTCGCAAAACCTGTCCGATATCGACAATATCCGCGATGCGCTGAAAAATTCCA
AAGGGCCAGGTAATTTCCGTAATCTGTTTCTGTATGCCCCCTGTGGCAAAAAAGACGGTATCCAAACTATTCCACTGTCT
GAAGCAGCAGCTAAGGATGAATTTTTAAATATCAAGAATGCCAGCCGCGACGACATACTGGCCGCGCACCGCGTACCACC
GCAGATGATGGGGATTATTCCACAGAATACCGGTGGCTTTGGCTATGTTGAGAAGGCGGCCAAGGTGTTCGTGCGTAATG
AACTAATGCCATTGCAAAGTAAGATGAAACAATTAAATGATTGGATAGGGGAAGACGTGATCCGGTTTGAACGGTATTCG
TTGGATCTGGATGAAGACGAATAG

Protein sequence : 
MKHLAFTFGDPIPVLDRREVFDYLECVLVDSWYEPPISFNGLALLFRSAPHHSSAVYVKRNILTSTFIPHSLLSRQAFDS
WALDFMLFGNAYLEQRKNRLGQPLKLNHCPAKFTRRGEDLETYWFVKYGYNSQPYPFPTGQVFHLIEPDINQELYGLPEY
LAALPSALLNESATLFRRKYYLNGSHAGYILYISDASQNLSDIDNIRDALKNSKGPGNFRNLFLYAPCGKKDGIQTIPLS
EAAAKDEFLNIKNASRDDILAAHRVPPQMMGIIPQNTGGFGYVEKAAKVFVRNELMPLQSKMKQLNDWIGEDVIRFERYS
LDLDEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-117 70
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-117 70
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 6e-80 58