Gene Information

Name : PAU_04294 (PAU_04294)
Accession : YP_003043122.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : putative capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4953552 - 4954388 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence :
ATGCCGAAAAAATCCAAACCCTTTCGAATTTGTGTGGAAGGCGCCACCACAGACGGGCGCAAGGTCCAGCGCGAATGGCT
GACGCAGATTGCCGCCAACTATGACCCGCAGACCTACGGCGCACGTATCAACATGGAACATTACAATTTTTCATGGAGTC
CGCGCTTTGGTGACGTGGAATCAGTTTTTACCGAAGAAATCAAGGAAGGTGTGTTGGCGGGTAAGTTGGGGCTGTATGGG
GTTCTTTCACCTACTGATGATCTGGTGGAAATGAACCGCCAGCGCCAAAAAGTTTACACTTCCGCCGAAATCAACCTGGA
TTTTGCTGATTTCGGCGGCGCGTATCTGGTGGGATTGGCCGTTACAGACAGTCCAGCCAGTCTTGGCACGGAAATGTTGC
AGTTCAGCGCCAACGCGGCTAATAACCCATTGAACTCACGCAAGCAGCACCCAAACAATGTTTTTACCGTTGCGGAAGAA
ACTCAGTTCGAATTTCTTAATTCGCCAGAGGAAACCGAAAAAATATCTCTCTTTTCCCGTGTACAGACGTTCTTCCAGAA
AAAGCAGCAGAACGATGATACACGTTTTACCGACATCCATCAGGCCGTTGAACTGTGCGCACAAGAGCAGCAAAACACGG
CTGAACAGGTGACGAAATTGTCTCAACAGATCGGTGAAATCGCGTCATTGAAACAACAACAGGTTGCACTGGAAACCCAA
CTTAACAACTTGAAAATCCAGTTAAGCCAGCAAGACAGTCAGACAACACAGCGCCCAGTTTCATTGGGAACACAGACTCA
CGACACCGCAACCGGCGAATACCTGACTAACTGTTAA

Protein sequence :
MPKKSKPFRICVEGATTDGRKVQREWLTQIAANYDPQTYGARINMEHYNFSWSPRFGDVESVFTEEIKEGVLAGKLGLYG
VLSPTDDLVEMNRQRQKVYTSAEINLDFADFGGAYLVGLAVTDSPASLGTEMLQFSANAANNPLNSRKQHPNNVFTVAEE
TQFEFLNSPEETEKISLFSRVQTFFQKKQQNDDTRFTDIHQAVELCAQEQQNTAEQVTKLSQQIGEIASLKQQQVALETQ
LNNLKIQLSQQDSQTTQRPVSLGTQTHDTATGEYLTNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 3e-56 49
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 3e-56 49
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-44 44