Gene Information

Name : PAU_03963 (PAU_03963)
Accession : YP_003042792.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4617856 - 4618608 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGGGCAAAACAGGTGCGGGAAAATCGTCACTCTGCAACGCGCTGTTCCAGGGTGAGGTCACACCTGTCAGCGATATCGA
CGCCTGCACCCGTGACGTGCTGCGATTGCGGCTGCGAAGTGGTGAGCATAGCCTGATACTTGTAGACCTACCTGGCGTAG
GCGAGAGCGAGCAACGAGATGAAGAGTATGAATATCTGTATCGCAAAGTTCTGCCTGAGCTGGATCTCATCCTATGGATT
ATTAAAGCTGACGATCGTGCTTTCTCCATCGATGAACGTTTCTACCGGCGAGTGATAGCTGGCTACCAACAGCGGGTGCT
GTTTGTTGTTAATCAGGCTGACAAAATAGAACCAAGCCATGAATGGAATTCTATCAGCAATACGCCTTCACATAATCAGT
CGGCAAATATGGAGGCCAGACTAGAATCCATTCGCCATCTTTTTTCATCGCATCTTCCGGTGTGTGCCGTTTCAGCCAGG
AAAGAATGGAATCTGCCGTCAATGGTAGAAACGATGATGCGTTGCCTGCCGGACCGTGCCGCCAGCCCATTGGCTACACA
ACTGCATGGGAGGTTATGCAGTGAACCGGTAAAAAAGCAGGCTCGTGAAGGCTTTGGCGATGCGGTTGGGGAGGTATTTG
ATTCTGCGGAAGCGGCATCATTTATTCCCGCGCCACTAAAAATGGTTATTCGTACTATTCGTGAGGTGGTGGTATCTGTT
GCCCGTGCCGTTTGGGACTGGATTTTCTTCTGA

Protein sequence :
MGKTGAGKSSLCNALFQGEVTPVSDIDACTRDVLRLRLRSGEHSLILVDLPGVGESEQRDEEYEYLYRKVLPELDLILWI
IKADDRAFSIDERFYRRVIAGYQQRVLFVVNQADKIEPSHEWNSISNTPSHNQSANMEARLESIRHLFSSHLPVCAVSAR
KEWNLPSMVETMMRCLPDRAASPLATQLHGRLCSEPVKKQAREGFGDAVGEVFDSAEAASFIPAPLKMVIRTIREVVVSV
ARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 1e-66 58
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 1e-66 58
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-66 57
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 8e-67 57
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-66 57
unnamed AAL08471.1 unknown Not tested SRL Protein 4e-67 57
Z1210 NP_286745.1 histone Not tested TAI Protein 8e-67 57
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 8e-67 57
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-66 57
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-66 57
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-66 57
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-66 56
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 4e-66 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_03963 YP_003042792.1 hypothetical protein VFG1674 Protein 5e-67 57
PAU_03963 YP_003042792.1 hypothetical protein VFG1062 Protein 2e-67 57
PAU_03963 YP_003042792.1 hypothetical protein VFG0654 Protein 2e-66 56