Gene Information

Name : PAU_03954 (PAU_03954)
Accession : YP_003042783.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4612733 - 4613443 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCAGAACCCTACGTATTGACGGAACACAATGAACTCATCCTCTCGACCAATATCGAACGTATTGTGACTGGCCG
CGATACTGCACTGGTGCAGATTAAACAGATTATCGAGCAGCTTGATGCTATATCCCGGTTAACCTCAGAAGTCGGCGGAG
GTACAGCGCAAGACTGGGCTATGAAGTCAGGTCACCGGTACGATAGCTGGCTGAATGAAGACGTTGATAAAGCGATACCT
GCGATCACCCGCAATATAGACCGCAGCATCTGGCGAGACCTGATGTTGAAATCCGGCATGATGGCTTTGATGGATGCGCA
GGCCCGCGACCAGTGGCATAAGAACCTTGAAGAGGGCGACCTCCCTGCAATCAGTGAGGGGAATATCCTCAACACCTTTG
AGCAGTTGCATCTCAACAAAATGGATGTCTTCGAACGTGGGATCATCAACGTCTTCAAAGGGCTATCATGGGATTACAAA
ACCAATAGTCCCTGCAGCTTTGGTAAGAAGATTATCATTAACAATCTGGTGACGTATAACCGCTGGGGCTTTAGTCTGAA
CTGGGGCTGGCGGCGAGATCAACTGGCAGACCTGGAGCGGATGCTGTTTCTTCTTGATGGTAAACCGATTCCTGAAAGTC
GTGGTGATGTCACTACCTCGGCTGATGGATCACATTCGGGACAACCCTTCGAAGGATGCTTACGAAGATGA

Protein sequence :
MQAEPYVLTEHNELILSTNIERIVTGRDTALVQIKQIIEQLDAISRLTSEVGGGTAQDWAMKSGHRYDSWLNEDVDKAIP
AITRNIDRSIWRDLMLKSGMMALMDAQARDQWHKNLEEGDLPAISEGNILNTFEQLHLNKMDVFERGIINVFKGLSWDYK
TNSPCSFGKKIIINNLVTYNRWGFSLNWGWRRDQLADLERMLFLLDGKPIPESRGDVTTSADGSHSGQPFEGCLRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08481.1 unknown Not tested SRL Protein 2e-49 59
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-59 58
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 8e-58 58
unnamed AAL57572.1 unknown Not tested LEE Protein 9e-58 58
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 8e-58 58
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 6e-58 58
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 7e-59 58
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 7e-58 58
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 1e-58 57
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-58 57
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-59 56
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-59 56
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-59 55
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-59 55
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 5e-58 55
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-54 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_03954 YP_003042783.1 hypothetical protein VFG1072 Protein 1e-49 59
PAU_03954 YP_003042783.1 hypothetical protein VFG0666 Protein 3e-58 58
PAU_03954 YP_003042783.1 hypothetical protein VFG1533 Protein 7e-59 57
PAU_03954 YP_003042783.1 hypothetical protein VFG1685 Protein 2e-54 52