|
Name : dnaB (PAU_03913) Accession : YP_003042742.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : replicative dna helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4564357 - 4565766 bp Length : 1410 bp Strand : - Note : - DNA sequence : ATGGCGGGAAAAAAATCAACTCACAACAAAGCGGTCGAACCAAAAGATCGCCAAATGGAAGGACTGAAGCTTCCGCCACA CTCTTTGGAAGCAGAGCAGTCCGTGCTAGGCGGTTTAATGCTAGATAATGAACGCTGGGATAATGTATCCGAACGTGTTA CTAGCAATGATTTTTTCAGTCGTCCACACCGGCGCATTTTTTCTGAAATGCAGCGATTGCTGGAGATGGGTAACCCAATC GATCTGATTACGTTATCTGAATCTCTTGAACAAAGTGGTGATTTGGGCAATGTAGGTGGTTTTGCTTATCTGGCCGAGTT ATCAAAAAATACGCCAAGTGCGGCTAACATTAATGCTTATGCAGATATTGTCCGTGAACGTGCTGTTGTCCGCGATATGA TTGCCGTTGCAAATGAAATTGCCGATGCAGGTTATGATCCACAGGGAAGGAGCAGCGAGGAGTTATTGGATCTGGCTGAA TCGAAGGTATTCCAGATTGCGGAAAATCGTGCCAGCAAAGATGAAGGACCAAAAGGAATAGAACGTATTCTTGAGGAAAC GGTGGAACGTATTGAGCAACTCTACCAGCGTCCTCATGATGGCGTAACCGGTGTTTCTACCGGCTATCAGGATTTGGATA AGAAAACCGCGGGATTGCAGAAGTCCGATCTGATTATCGTGGCTGCTCGTCCTTCTATGGGTAAAACCACTTTCGCTATG AACCTGTGTGAAAACGCAGCCATGATGCAAGATAAGCCAGTTTTGATCTTCAGCCTTGAGATGCCCGGCAACCAGATCAT GATGCGTATGTTGGCATCCCTTTCACGAGTGGATCAAACTCGTATCCGCACCGGCCAGCTTGATGATGAGGATTGGGCGC GGATTTCCAGTACGATGGGGATATTGCTGGAAAAACGCAATATGTATATTGATGATTCGTCTGGCCTGACACCTACCGAA GTCCGTTCCCGCGCCCGGCGTGTTTTTCGTGAAAATGGTGGATTGAGTCTCATCATGATCGACTACCTGCAATTAATGCG GGTGCCGTCTTTATCTGATAACCGTACTTTGGAAATTGCAGAGATTTCCCGTTCATTGAAGGCGTTGGCTAAAGAGCTCC AGGTGCCGGTGGTTGCACTTTCTCAGCTCAATCGTAGCCTTGAACAGCGGGCAGATAAGCGCCCTGTTAACTCTGATTTA CGTGAATCCGGCTCTATTGAACAGGATGCCGACCTAATTATGTTCATCTATCGTGACGAGGTTTACCATGAGAGCAGCGA CATGAAAGGTGTAGCTGAAATCATTCTTGGTAAGCAGCGTAACGGTCCAATTGGTACAGTTCGCCTGACGTTTAATGGTC AATGGTCGCGGTTTGATAACTATGCCGGACCAAGTTATGACGACGAATAA Protein sequence : MAGKKSTHNKAVEPKDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVTSNDFFSRPHRRIFSEMQRLLEMGNPI DLITLSESLEQSGDLGNVGGFAYLAELSKNTPSAANINAYADIVRERAVVRDMIAVANEIADAGYDPQGRSSEELLDLAE SKVFQIAENRASKDEGPKGIERILEETVERIEQLYQRPHDGVTGVSTGYQDLDKKTAGLQKSDLIIVAARPSMGKTTFAM NLCENAAMMQDKPVLIFSLEMPGNQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTPTE VRSRARRVFRENGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDL RESGSIEQDADLIMFIYRDEVYHESSDMKGVAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPSYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-100 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-105 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-104 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-89 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-89 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-85 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-79 | 46 |
