Gene Information

Name : ssb (PAU_03907)
Accession : YP_003042736.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : single-stranded dna-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4555327 - 4555860 bp
Length : 534 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAGCAGAGGCATAAACAAAGTTATTTTAATTGGTAATCTGGGGCAGGACCCTGAAGTTCGCTACATGCCGAACGG
TGGCGCAGTTACCAACATTACTCTGGCGACTTCTGAAAGCTGGCGCGATAAACAAACCGGCGAGATGAAAGAAAAGACTG
AATGGCACCGGGTTGTTTTATTCGGCAAACTGGCAGAAGTTGCGGGTGAATATCTGCGTAAAGGTTCACAAGTTTATATT
GAAGGCTCTCTGCAAACTCGCAAATGGCAGGATCAGAACGGCCAGGATCGTTACACCACTGAAGTGGTGGTAAACATGGG
TGGTACCATGCAAATGTTGGGTGGTCGAGCGGGTGGTAGTTTCCAGGAGGGACAACCACAAGGCGGTGGTTGGGGACAGC
CACAGCAGCCACAATTACAACCACAACAATCTCAGCAGTTCAGCGGCGGCGGTGCTCCTTCTCGCCCTGCTCAATCCTTT
GCTCCACAAAGTAATGAACCGCCAATGGATTTTGATGATGATATTCCGTTCTGA

Protein sequence : 
MASRGINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWQDQNGQDRYTTEVVVNMGGTMQMLGGRAGGSFQEGQPQGGGWGQPQQPQLQPQQSQQFSGGGAPSRPAQSF
APQSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 6e-37 66
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 7e-46 63
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-45 63
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-45 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_003042736.1 single-stranded dna-binding protein VFG0576 Protein 1e-46 72