Gene Information

Name : PAU_03798 (PAU_03798)
Accession : YP_003042627.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4406762 - 4409386 bp
Length : 2625 bp
Strand : -
Note : -

DNA sequence :
ATGCCAGATATCAATCGCCAGTCACTATTTAATAAACTTAATCCGCCCTTGTTTAGTGCTTTGGAAAGCGCCAGTGCATT
TTGTAAGCTACGGGGCAATCCTTATGTTGAACTGGCGCACTGGTTGCATCAGCTAATGCAGCAGAAAGCGGGCGATCTAC
AACAGATCATGGGCCATTTTGCCTTGGATGAGCAGCAGGTGGCACGGGATATTGTGCAAGCGCTGGATATGTTACCGCGT
GGAGCGAGCGCGATTTCTGATCTTTCTGCACATATTGACGAGGCAGTAGAACGGGCTTGGGTGTGTAGTTCTGTGACCTT
TGCGGCAGGTGAAATTCGTGGTGCTCACCTGTTGCTGGCCCTGTTGACGACTTTTAATCTGCGCCAGCATTTGTTAGCTA
TTTCCGCTCAGTTTGCCCGTATTAATGCGGGAAGTTTGGCGCAGGATTTTACTCATATCCTGAGCAACAGTACGGAAAAT
GGTCCTCAGAGAACGCAGGCAGAGAATGGGAATAATCAGTCAACATCAGAGAGTGCGTTACAAAATTATGCGCAGGATAT
GACTGCACTCGCGAGGGATGGGCGAATTGATCCTGTTGTTGGTCGGGATAAAGAGATTCGCCAATTGGTTGATATTCTGC
TACGCCGTCGGCAAAACAATCCTTTGATTACTGGTGAGGCTGGCGTGGGTAAAACGGCGCTGGTGGAAGGATTGGCATTG
CGTATTGCATCGGGTGATTTGCCGCCGTCATTGTGTCATGTTCAGCTTTGGTCATTGGATATTGGCCGTTTGGAAGCGGG
CGCTGGCATGAAAGGAGAATTTGAGGCACGTTTGCAAGCGGTGATTAATGAAGTTCAGCAAAGCCCGGTTCCCATTATTC
TGTTTATTGATGAGATACATATGCTAATTGGTGCGGGCGGTGCGCAAGGAGTTGGTGACGCCGCGAATTTGTTAAAACCG
GCTCTGGCGCGTGGACAGTTGCGGACTATTGGTGCCACCACCTGGGCGGAATACAAAAAGCATATTGAAAAAGATCCGGC
GCTGACCCGGCGTTTCCAGGTATTACAGGTCGAACAGCCAGACGAAGCGCTAGCTTTACAAATGATACGGAGTTTGTCTG
GGCAACTGGAACAGCATCATGGTGTGTTATTACTGGACGAGGCGCTGGAAGCGGCGGTATCGCTCTCTCATCGTTATATT
CCGGCTCGCCAATTGCCTGATAAAGCCATAGCTTTGCTTGATACCACCTGTGCACGGGTCGCGGTTAGCCAGCACAGTCA
ACCGGCGGTATTGGAGGATTATCGCCGTCAGCTTGATGCACTCCAAATTGAATATGAGATTGTTTGCCGCGAGCAGCAAC
TGGGGGGGGATCATGATGCACGCTTGGCTCAGCTTGATGAGCAGCGCGGTGAATTGCGGGCGGAGGAAGAACTGATGGTT
CAACGTTGGCAGGCTGAAATAGCACTAGCTCAGCAGATTATCAGCTTGCGCCAACAACTGATTGCTAATGATGAAACTGC
GGTAGATGATGCACAGCGTCTGGCCTGGCAGACACAGTTACAGGATTGTCGGCAACAATTGAGTTTGTTGCAGGGAGAAC
AGCCATTAATCACGGTGGCGGTGGATGCGCACAGTGTTGCGGCGGTGGTTGCGGATTGGACCGGCATCCCGCTTGGTCGG
ATGGTAAAAAATGAGCTCAATGTTGTTCAGAATCTGGAACACAGCTTAGGGCAACGGGTTATTGGTCAGCAATACGCGCT
AAATATCATCAGTGAGCGGGTGCGGACAGCGCGTGCACATTTGGCTGATCCTAGTAGACCGGTGGGAGTATTTCTGCTGT
GTGGTCCTTCTGGAGTCGGGAAGACCGAAACGGCATTAGCACTTGCTGAGAGCCTATATGGTGGTGAACAGAATCTGATT
ACCATCAATATGAGTGAGTTTCAGGAGCCACACAGCGTATCAACTCTGAAAGGGGCGCCACCGGGATATGTTGGTTATGG
TGAAGGTGGAGTCTTAACAGAAGCGGTTCGGCGACGCCCATACAGTTTGGTGTTGCTTGATGAGGTGGAAAAAGCCCATT
CTGATGTGCATGAACTGTTTTTTCAGGTATTCGATAAAGGCTGGATGGAAGATGGTGAAGGTCGGCGCATTGATTTCCGT
AATACACTGATCATATTGACCTCGAATGTGGGTAGTCAGGAAGTTATCAACGCTTGTAGCCGGCAGGATGGTTTGCCGAA
TATAGAAACGTTGACACAGCAGTTACGCCAACCGTTGTTACGGGCTTTTCCTGCCGCACTGCTTGGCCGTTTGACGGTTC
TTCCTTTTTTATCATTGAGTGACGAAATGTTGGAAAATATTGTGCAATTGCAGCTGGCGCGGGTGGCACAACGTTTGCGG
GAAAATCATGGTATTGCAGCGCAGTTTGACCACCGAGTGACGCGACAGATTATGTCCTGTTGTATGGAACAGGAATCTGG
TGCTCGCAGGATTGATTCGATTATTACGAATACTTTATTACCGCAAATTAGTCGTAAGTTGCTGACCGCAACAATAGAGA
ATCAGCATTATTCACAATTGCAGGTAACTTGGGAGGAGACGGCGTTTCAGTGTCATTTTTGCTGA

Protein sequence :
MPDINRQSLFNKLNPPLFSALESASAFCKLRGNPYVELAHWLHQLMQQKAGDLQQIMGHFALDEQQVARDIVQALDMLPR
GASAISDLSAHIDEAVERAWVCSSVTFAAGEIRGAHLLLALLTTFNLRQHLLAISAQFARINAGSLAQDFTHILSNSTEN
GPQRTQAENGNNQSTSESALQNYAQDMTALARDGRIDPVVGRDKEIRQLVDILLRRRQNNPLITGEAGVGKTALVEGLAL
RIASGDLPPSLCHVQLWSLDIGRLEAGAGMKGEFEARLQAVINEVQQSPVPIILFIDEIHMLIGAGGAQGVGDAANLLKP
ALARGQLRTIGATTWAEYKKHIEKDPALTRRFQVLQVEQPDEALALQMIRSLSGQLEQHHGVLLLDEALEAAVSLSHRYI
PARQLPDKAIALLDTTCARVAVSQHSQPAVLEDYRRQLDALQIEYEIVCREQQLGGDHDARLAQLDEQRGELRAEEELMV
QRWQAEIALAQQIISLRQQLIANDETAVDDAQRLAWQTQLQDCRQQLSLLQGEQPLITVAVDAHSVAAVVADWTGIPLGR
MVKNELNVVQNLEHSLGQRVIGQQYALNIISERVRTARAHLADPSRPVGVFLLCGPSGVGKTETALALAESLYGGEQNLI
TINMSEFQEPHSVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSLVLLDEVEKAHSDVHELFFQVFDKGWMEDGEGRRIDFR
NTLIILTSNVGSQEVINACSRQDGLPNIETLTQQLRQPLLRAFPAALLGRLTVLPFLSLSDEMLENIVQLQLARVAQRLR
ENHGIAAQFDHRVTRQIMSCCMEQESGARRIDSIITNTLLPQISRKLLTATIENQHYSQLQVTWEETAFQCHFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 54
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-119 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-119 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_03798 YP_003042627.1 hypothetical protein VFG2076 Protein 0.0 54
PAU_03798 YP_003042627.1 hypothetical protein VFG2084 Protein 2e-136 44