Gene Information

Name : PAU_03781 (PAU_03781)
Accession : YP_003042610.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4383790 - 4384425 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTGCTATAAAGTTTTGCTAGTGGATGATCATGAGCTGATCATAGATGGAATAAAGAACCTTCTTGCTGCATATCC
GCGTTATCAAGTAGTCGCGCAGGTTGATGATGGGCTAGCTGTTTATGCTGCCTGCCGAGATCTTGCACCGGATATTGTTA
TTCTTGATCTTGGTCTTCCTGGGCTAAATGGATTGGATATTATTCCACAACTTTGCCAACGTTGGCCGGATTTACGCATA
CTTGCCCTTACTGCCCATGATGATGAATTAACGGCCAGCCGTGTACTACGTGCAGGGGCATTAGCCTATGTTTTGAAAAC
CAGCTCACAGCAGATATTACTTGCTGCAATTACCAGCGTTGCAGCTAAAAAAAGTTACGTTGATCCTAACCTGAATCAAG
AGGCTGTTCACCGGTTAGGAGAGGGAACGAATGATGACAGTACATTACTTACTCGACGCGAGCGCCAAATATTACAGCTA
ATCAGCGAAGGTAATGGCAACCGTAATATTGCGGAGATGCTAAGTATTAGTGTTAAAACAGTAGAGACTCACCGCCTTAA
TATGATGCGAAAACTCAAAGTTCATAAGGTCACTGAATTACTTAAATACTCGAGAAAGTTAGGATTAATAACTTGA

Protein sequence : 
MICYKVLLVDDHELIIDGIKNLLAAYPRYQVVAQVDDGLAVYAACRDLAPDIVILDLGLPGLNGLDIIPQLCQRWPDLRI
LALTAHDDELTASRVLRAGALAYVLKTSSQQILLAAITSVAAKKSYVDPNLNQEAVHRLGEGTNDDSTLLTRRERQILQL
ISEGNGNRNIAEMLSISVKTVETHRLNMMRKLKVHKVTELLKYSRKLGLIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 2e-51 63
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 1e-45 58
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 1e-45 58
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 1e-45 58
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-45 58
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-38 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_03781 YP_003042610.1 putative two-component response regulator VFG0492 Protein 4e-46 58