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Name : kdsD (PAU_03674) Accession : YP_003042504.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase) Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 4277595 - 4278563 bp Length : 969 bp Strand : + Note : - DNA sequence : ATGCCTAAAATTGATTTTCAGCAAGCGGGTAAGAGAGTATTACACATAGAGCGTGATGGGTTAGCAGAACTTGAGCAATA CATAAATGAAGATTTTACCCGTACCTGTGAACTGATGTTCAACTGCGAAGGTAAGGTTATTGTCATGGGGATGGGTAAAT CTGGTCATATCGGCTGTAAAATCGCCGCAACTTTCGCCAGTACTGGCACACCTTCCTTTTTTGTGCATCCAGGAGAAGCC AGCCACGGTGATCTCGGTATGATTACCCCGCAAGATATTGTTCTGGCAATCTCGAATTCTGGTGAATCCAATGAAATTCT GTCACTGATCCCTGCGCTAAAACGCCAAAAAATTCCACTCATCTGCATGACGAACAATCATAACAGCAGCATGGGAAAAG CCGCAGACATCCATTTGTGCATCAAAGTCCCACAAGAAGCCTGTCCGCTAGGTTTGGCTCCAACAACGAGCACCACGGCA ACATTGGTGATGGGAGATGCTTTAGCTGTCGCACTACTTCAAGCACGTGGCTTTACCGCTGAAGATTTCGCGCTATCACA TCCAGGCGGCGCACTTGGACGCAAACTTCTGCTGCTAGTCAGTGATTTAATGAATACCGGTGATGATATTCCACGAATTA ACCGTGATTCATCCTTACGTGAAGCACTGGTTGAAATTACCCGTAAAAAACTGGGTATGACAGTCATTTGCGATGAAAAT ATGCATATTGATGGTATTTTTACCGATGGTGACTTACGCCGCGTTTTTGATATGGGAATTGATTTGTACAACGTCAAAAT TTCAGATGTTATGACAGCAGGAGGTATCCGTATAAAACCTAATGCCCTGGCAGTTGATGCATTAAACTTAATGCAATCAC GCCATATCACTTCCGTACTGGTTACAGAGGGAAATAAATTGCTTGGTGTATTACATATGCATGACCTTTTACAAGCCGGT GTGGTTTAA Protein sequence : MPKIDFQQAGKRVLHIERDGLAELEQYINEDFTRTCELMFNCEGKVIVMGMGKSGHIGCKIAATFASTGTPSFFVHPGEA SHGDLGMITPQDIVLAISNSGESNEILSLIPALKRQKIPLICMTNNHNSSMGKAADIHLCIKVPQEACPLGLAPTTSTTA TLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLLVSDLMNTGDDIPRINRDSSLREALVEITRKKLGMTVICDEN MHIDGIFTDGDLRRVFDMGIDLYNVKISDVMTAGGIRIKPNALAVDALNLMQSRHITSVLVTEGNKLLGVLHMHDLLQAG VV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-53 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 5e-53 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-52 | 44 |
