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Name : proV (PAU_03177) Accession : YP_003042007.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : glycine betaine/l-proline transport atp-binding protein prov Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 3736411 - 3737610 bp Length : 1200 bp Strand : + Note : Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits this transport system to accumulate glycine betaine and other solutes which offer osmo-protection. DNA sequence : ATGGCAATTAAACTCGAAGTTAAAAACCTCTATAAAATATTCGGCGATCATCCAGAATGTGCACTCAAATTACTCAATTC TGGTTTGAATAAAGATCAGATATTTGAAAAGACAGGTCTAGTTGTTGGTATACAAAATGCCAATCTGGCCATTGAAGAAG GCGAAATATTTGTCATCATGGGATTATCCGGCTCCGGTAAATCCACAATGGTACGCCTTCTCAATCGTCTGATAAAACCA ACTCGCGGTCAGGTATTAATTGATGGTGAAGATATTTCTGAGATTTCAGAGACAGCGTTAAGAGAAATTCGCCGTAACAA AATCAGTATGGTTTTCCAATCATTCGCATTAATGCCGCATTTAAACGTACTGGAAAACAGTGCTTTTGGCATGGAACTTG CCGGTATCTCTAAACAAGAACGTCACAAAAAAGCGTTGGATGCACTGAAACAGGTAAATCTGGAGAATTACGCGCAATCC TATCCAGATGAACTTTCTGGCGGTATGCGCCAACGTATTGGACTTGCCAGAGCATTAGCTAATGACCCTGATATTTTGCT GATGGATGAAGCGTTTTCTGCCCTTGACCCATTAATTCGTACAGAAATGCAGGACGAGCTGCTAAGCCTACAAGGTAATC AACCACGAACCATTGTTTTTATCTCCCACGATTTAGACGAAGCAATGCGTATCGGTGATCGGATCGCTATTATGCAAGGC GGTGTTGTTGTACAGGTTGGGACACCTGATGAAATCCTGAACAATCCAGCCAATGACTATGTGAGGACCTTTTTCCGTGG CGTAGATATCAGCCATGTATTCAGCGCTAAAGATGTTGCTCGCCGTCGTCCTGACTCTCTTCTTCACGTCGCACCGGGTT TTGGTCCTCGTTCTGCATTGAAAGTTCTTGATGATGAAAACAGAAGTTATGGTTACCTGATTGAACGTGGACAAAAATTC GCGGGCATAGTCTCGGTAAATTCATTGGAAAAAGCATTACAGGAAAAAAAACCTATCGAACATGCCATATTGGCGGAACC GACTGCCGTTACCGCAGATACGTCTCTTAATGAATTAATTTCTGTTGTAGCACAATCACCTTGTGCAGTTCCGGTTGTTG GGGATAACGACAAATACATTGGTGTTATTTCCAAAGGGATGCTGTTGCAAGCTTTAGACAAGGAGACATCAATTGAGTAA Protein sequence : MAIKLEVKNLYKIFGDHPECALKLLNSGLNKDQIFEKTGLVVGIQNANLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIKP TRGQVLIDGEDISEISETALREIRRNKISMVFQSFALMPHLNVLENSAFGMELAGISKQERHKKALDALKQVNLENYAQS YPDELSGGMRQRIGLARALANDPDILLMDEAFSALDPLIRTEMQDELLSLQGNQPRTIVFISHDLDEAMRIGDRIAIMQG GVVVQVGTPDEILNNPANDYVRTFFRGVDISHVFSAKDVARRRPDSLLHVAPGFGPRSALKVLDDENRSYGYLIERGQKF AGIVSVNSLEKALQEKKPIEHAILAEPTAVTADTSLNELISVVAQSPCAVPVVGDNDKYIGVISKGMLLQALDKETSIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 2e-89 | 49 |
