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Name : api89 (PAU_03009) Accession : YP_003041839.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : putative membrane-bound sugar-binding protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 3484950 - 3489221 bp Length : 4272 bp Strand : - Note : Contains RHS domain and YD repeats.These repeats appear in general to be involved in binding carbohydrate DNA sequence : ATGCCAGAAGCCGCACGCTTGGGGGATACCATCGGGCATTCCAGTGCCATGGCCGGATTGATTGCCGGCACCGTCATCGG GTCATTAATTTCAGCTGCCGGAGGAATTTTATCCGGCGCTCTCTTTATCGCGGGATTGGCTGCATCCTGTATCGGGGTGG GCGTTTTGTTGATTGGCGCCGCGATTGCGGTAGGCATGGCGGCGGGATATTTAGGCGACATGGCGCGTGATGCCAGTGTC GCGGCGGGCGCTTCATCGCGAAGTCCCTGCGGGGAAATCAAAACAGGCTCCCCCAATGTCGCTATCAACAACAAACCCGC TGCTATAGCCACACGCAGTCAGGTAGCGTGCAGTAAAGAGAGCGGCATTCGCCAGATGGCGGAAGGCTCTGACTCTGTTT TCATCAATGGCTGTCCGGCGGTACGGGTTGGCGACAAAACGGTCTGTGATGCCGCAGTCATGACCGGGTCGTCGAATGTC TTTATCGGCGGGGGGACTGCGCGGAAAGTCACTATTGTGCCGGAAGTCCCGCCATGGGCGTATACCGTTTCCGATTTAAC GATGCTGGCGGCAGGGTTCGCCAGCTTCGGTGGGGCGGCAGCCAAAGGGCCCGGGGCTTTACAAAAGCTGTTCGGCAAGA TACCGGGGGCGGCTAAAATTCGCCAAATCACCTGTCGGCTGGGGGTGCTGGCTGTCGCCGTGCCTGTTGTGGGGATTCTC ATGAACCCCGTGGAAGTTATCGCCGGCCAGAAGTTCCTGAACGATGAGGATGAGCGGGATTTTATGCTGGCGGGCGAACT GCCGCTTGATTGGCAACGCAGCTACCTGAGCCGTTATCGCTATGACAGCGTGCTCGGACCGGGCTGGAGCCTGTTCTGGG AAAGCCGCCTCACGCGCGTGGAAGACGGATTACTCTGGCGTTCCCCGTCAGGAGATATCGTGCCCTTTCCTGATGTGCCG GCAGGACACCGCTGTTTCTGCCCGGATGCCCAAAGTGAGCTGATACACACGCCGGAAGAGACCTGGGAAATCCGTGATGC CGGCGAACAGGTTTATCATTATGCGGCGTTCGATGATGACGGCATTAGCCGCCTGAGTCATATTCGCGATAACGTGGGCA ACGAGCAACGCTGCCATTACAACGCGCAGCATCAGATGGTCACCATCACGGGCAGCGGCGGGCTTACCCTGCACTGCGAT TACATGATGAGGGAAAACGATACCCAAACGCTCTCCCGTCTCACCGCTGTCTGGCGTGAACTCCCTGATGGCCAGCGCAT CCTGCTTTGCCGCTACCACTATAATGACCAGGCGCAATTGACCGGGGTCAGCCATCGCAACGATTCTCTCCAGCGCCAGT TCGGCTGGACTGAGCACGGCCTGATGGCCTGGCATCAGGATGCGCGGGGGCTACGCTGTGATTACCAGTGGGAGCAGGAT AAAGAGGGTTGGTGGCGCGTCATGGCCCAGCAAACCAGCGAAGGGGCGGGTTACCAGCTGGCCTACGATGACGAAAACCT CACCCGCACCGCCCACTGGCATGACGGCACCCGCACGGTGTGGCACCTCAACGACGCACACCACATTATCCATTGCCTCG ACCGCACGGGCACCGAACATCATATCCTGTGGGATGAATTTGGCCTGCCGAACGGCTACAAAGATGCGGATGGCAACACC CGCCTGAGTGAATGGGACCAACACGGTCGCCAGCTGAGTTTCACCGATGCTAACGGCAACCAGACCCGCTGGCAGTACGA GAATGATAGCGACCGGCTCACCTTTATTTTCTGGCCGGATGGCACAGAAACAGCGCTGACTTACGATAACCTCGGGCGGC TGATTAGCGAAACCTCGCCACTAAAACAGACCACCCATTACCACTATAGGCATCGTCACACGCAGCGGCCGGACCGGCGC ACGGATGTTAAAGGGGGCGAGAGCCAGTTTTTGTGGAATGAACAGGGGCAGCTTATCCGCCATGCGGACTGTTCTGGTCA GTCCACAATATGGAGTTATGACCGGGAGAATCGGCTGGAAAAAGTCACCAATGCCCTGATGGAAAGTACCCGCTATCACT ATGGTGATGATGGTCAACTGATTCAGGTCACCTATCCGGATGACTCCACCGAACAGATGACCTGGGACCCGGCAGGCCAG CTTATCAGTCACCAGCGCAATCAAAACCCGCCCCGTCATTGGGCATATAACGCGCGGGGTCAGGTCGTTTGTACCACTGA CCGGCTGCAACGGCAGGTGTATTACCACTACAACCCCGAAGGCCATCTGATCCGGCTCGACAACGCCAACGAGGGCCGCT ACCTGCTGAACCGGGATGCCGAAGGACGCTTAATCGAAGAAATCCGCCCCGACGACACCTTAATCCAGTACGAATACAAC GCGGCGGGCTTGCTGAGCCTCGAACGGCGGCTGGGAGACCGCGTGTTCCGGCACCCGGAACGTCGGGTACATCAGCATTA TGATGCGGCGGGATATCTTATTCAGCGGGAAACCCACACGGACACTTATCAGTACCAGTGGGACAACATGGGCAGATTAC TGACAGCCCGCCGTGAACCCAATGACAACGGAAAACAGCTGGGGATAGAGCCCAACACGGTGCGTTTTAATTATGACGCT GTGGGGCGGGTCATTCGGGAGCAGAATGGCGACGACAGCCTCCAATTCAGCTACGACGAGCTGGATAACCTGACCGCCCT CACCTTGCCCCATGGCGGCACCTTAAGCTGGCTCTACTACGGCTCGGGTCACCTGAGTGCCATCCGGCACGGGCAGACAC TCCTCACTGAATTCGAGCGTGACCGCCTGCATCGAGAAACCCGCCGCACGCAGGGCAAACTGTTCCAGCAGCGCGATTAC GATCGACTGGGACGCTGTACCCATCAATATAGCCTGCCGTTGAAACAGGCTGATGCTGAACCGCTGCCTTACCTTAGCGA AGGCAAGCCATGGCGGGCGTGGATCTACAACCCCCAAGACGAATTGCAGGTGATGGAAGACCATTACCGGGGCGTGATTG AATATCTTTATGACTCGGAAAGTCGCCTGAAAAAAGTGACACACTGGGGCAGTGCTTATGATGATATGTTGTGGTATGAC CGGGCGGATAACCTGCTGGAGCAACCTCAGGCAATACTGGAGCGTGAGGCGGCAGAGCGGGGGCTGTCCAAAACGATGGA GCCGCAGGGTGACCGCCTGAACCACTGGCGTGACTGGTGCTATGAACATGACACGCATGGCAACGTTATCAGCCGGGGAC GCGAGACGCGGGAAACCCAGCATTACCGTTATGATGGTGACAATCGGCTGACTGTGGCGGTTATCGGCACCACAACGGCA CGTTATCACTACGATGCCCTGGGGCGGCGTATCCGTAAGGTGGTGAAAATCGGGATTGATGGACTGGCGCGTTATGAACA GACCGATTTTGTCTGGCACGGCCTGCGACTGTTGCAGGAGCGGGATGGGAAAAGTGGCGAAACCCAGACCTACTGCTACG AATCCCATGACAGTTACACCCCGCTGGCCAGCATCGTCACGAGAGGCGCCACGCACAATTACTTCTGGTATCACACCGAT ATCAACGGTGCGCCGTTGGAAGTGACGGATGAGGAGGGCAAAATTGCATGGGCGGAGAAATACAGTACCTTCGGTGAACT GGGGGGAACTCCGCTGGATTACTTCACCGATCCTGACCGCTCATCGTGGAGCTCGCGTTTCAGACAAAATCTGCGTTATG CGGGACAATATTTTGACAAAGAGACGGGGCTGCACTTTAATACTTATCGGTATTATGCCCCGGAGATTGGCCGGTTTATC TCGCCAGACCCGCTCGGGCTGGAAGGGGGTCCGAATCCCTATTCGTATGTTCATAACCCGGCGAACTGGATTGACCCATT CGGGTTAGCAGCTTGTCCAACACAAAAATACGAAGTTAGTACATTCGATGATTTACAGAGACGTTCTAAGGTGGGTGATA AATTAGATATCCACCATGCGGCTCAAAAACATCCTGCGGGGCAGGTAATTACTGGTTATGATCCTAAAGTAGCTCCATCA ATAGCTCTCCCTAGAGGAGAACATAAACTGATTCCTACTATGAAAGGACCGTATACGGGATCGGCTAGAGATTTATTGGC AAAAGATATTAGAGATTTGCGCAATTATACTAATGCCCCTCCTTCAGCAATAAAAGATTTGCTCAATTTAAATAAAGAAA TGTATCCAGAAGCCTTCACTAAAATAAGGTAA Protein sequence : MPEAARLGDTIGHSSAMAGLIAGTVIGSLISAAGGILSGALFIAGLAASCIGVGVLLIGAAIAVGMAAGYLGDMARDASV AAGASSRSPCGEIKTGSPNVAINNKPAAIATRSQVACSKESGIRQMAEGSDSVFINGCPAVRVGDKTVCDAAVMTGSSNV FIGGGTARKVTIVPEVPPWAYTVSDLTMLAAGFASFGGAAAKGPGALQKLFGKIPGAAKIRQITCRLGVLAVAVPVVGIL MNPVEVIAGQKFLNDEDERDFMLAGELPLDWQRSYLSRYRYDSVLGPGWSLFWESRLTRVEDGLLWRSPSGDIVPFPDVP AGHRCFCPDAQSELIHTPEETWEIRDAGEQVYHYAAFDDDGISRLSHIRDNVGNEQRCHYNAQHQMVTITGSGGLTLHCD YMMRENDTQTLSRLTAVWRELPDGQRILLCRYHYNDQAQLTGVSHRNDSLQRQFGWTEHGLMAWHQDARGLRCDYQWEQD KEGWWRVMAQQTSEGAGYQLAYDDENLTRTAHWHDGTRTVWHLNDAHHIIHCLDRTGTEHHILWDEFGLPNGYKDADGNT RLSEWDQHGRQLSFTDANGNQTRWQYENDSDRLTFIFWPDGTETALTYDNLGRLISETSPLKQTTHYHYRHRHTQRPDRR TDVKGGESQFLWNEQGQLIRHADCSGQSTIWSYDRENRLEKVTNALMESTRYHYGDDGQLIQVTYPDDSTEQMTWDPAGQ LISHQRNQNPPRHWAYNARGQVVCTTDRLQRQVYYHYNPEGHLIRLDNANEGRYLLNRDAEGRLIEEIRPDDTLIQYEYN AAGLLSLERRLGDRVFRHPERRVHQHYDAAGYLIQRETHTDTYQYQWDNMGRLLTARREPNDNGKQLGIEPNTVRFNYDA VGRVIREQNGDDSLQFSYDELDNLTALTLPHGGTLSWLYYGSGHLSAIRHGQTLLTEFERDRLHRETRRTQGKLFQQRDY DRLGRCTHQYSLPLKQADAEPLPYLSEGKPWRAWIYNPQDELQVMEDHYRGVIEYLYDSESRLKKVTHWGSAYDDMLWYD RADNLLEQPQAILEREAAERGLSKTMEPQGDRLNHWRDWCYEHDTHGNVISRGRETRETQHYRYDGDNRLTVAVIGTTTA RYHYDALGRRIRKVVKIGIDGLARYEQTDFVWHGLRLLQERDGKSGETQTYCYESHDSYTPLASIVTRGATHNYFWYHTD INGAPLEVTDEEGKIAWAEKYSTFGELGGTPLDYFTDPDRSSWSSRFRQNLRYAGQYFDKETGLHFNTYRYYAPEIGRFI SPDPLGLEGGPNPYSYVHNPANWIDPFGLAACPTQKYEVSTFDDLQRRSKVGDKLDIHHAAQKHPAGQVITGYDPKVAPS IALPRGEHKLIPTMKGPYTGSARDLLAKDIRDLRNYTNAPPSAIKDLLNLNKEMYPEAFTKIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3692 | YP_001402646.1 | RHS/YD repeat-containing protein | Not tested | YAPI | Protein | 0.0 | 53 |
| api89 | CAF28563.1 | putative membrane-bound sugar-binding protein | Not tested | YAPI | Protein | 0.0 | 52 |
