Gene Information

Name : PAU_00287 (PAU_00287)
Accession : YP_003039126.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 318527 - 320005 bp
Length : 1479 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTACATGAAGAGAGCAGTACAACATTAGCCCCAGGCTCCACTACCTCTTTGCTTGACGAAATCATGTCTCAGGC
AAGAATGACGCCAGAAAATGACGGCTACCATATTGCAAAACAAGGTGTTGCCGCTTTTATTAGCAGCATTTTGGATACAG
GCTCTAACGAGGAACCTATCAACAAGCTTGTGGTTGACAGAATGATTGTTGAGCTTGATAAAACGCTCAGCACTCAGGTC
GATGAAATCATGCACGCTAAAGAATTCCAGGAACTGGAATCATCATGGCGTTCACTGAAGTTATTAGTTGATCGTACAGA
TTTCCGTGAAAACATTAAGATCAACATTATCCATGCCACCAAAGAAGAATTACTGGAAGATTTCGAGTTCTCACCAGAAA
TCATTCAATCAGGCTTATATAAACATGTTTACTCAACCGGTTATGGCCAGTTTGGTGGTGAACCTGTTGCCGCAGTCATT
GGTAACTATGCCTTTAGTAATAGCTCACCGGATATCAAACTGATGCAATATGTCAGTGCGGTTGGAGCGATGGCTCACGC
GCCATTCCTTTCTTCCGTTGCGCCTGATTTCTTTGGCATCAGCAGCTTTACAGAACTGCCCGCAATTAAAGATCTAAAAT
CCGTTTTCGAAGGTCCAGCACACACTAAATGGCGTGCACTACGCGAATCTGAAGATTCACGTTATCTCGGACTGACAACG
CCACGTTTCCTGTTACGTCTGCCATATTCAACGGTGGAAAACCCAATTAAGAACTTTAACTATCAGGAAGACGTCAGCAA
AGATCACGAACATTTCCTGTGGGGCAATACCGCTTATCTGCTGGCAACCTGCCTGACAGACAGCTTCGCCAAATATCGCT
GGTGTCCGAACATTATCGGTCCACAAAGCGGTGGTACTGTTAGCGATCTACCGGTTCACCTGTTCGAAGCCATGGGGCAA
ATCCAAGCCAAGATCCCAACAGAAGTTTTAATTACTGATCGCCGTGAATTTGAATTGGCGGAAGAAGGTTTTATCACCCT
GACGATGCGTAAAGGCAGTGACAATGCCGCATTCTTCTCTGCCAACTCAGTTCAGAAACCCAAAGTGTTCCCAAATACGC
GCGAAGGGAAAATGGCGGAAACCAACTACAAATTGGGTACTCAACTGCCATATATGTTCATTATCAACCGCCTTGCACAC
TACATCAAAGTGTTACAGCGCGAGCAAATTGGTTCCTGGAAAGAGCGTCAGGATCTAGAGCGTGAGCTAAACACCTGGCT
GAAACAATACATCGCTGATCAGGAAAATCCACCAACTGATGTCCGTAGCCGTCGTCCTCTGCGCTCCGCCCAAATTCAGG
TTTTGGACGTGGAAGGAGATCCAGGTTGGTACCAAGTGGCAATGCAAGTTCGCCCTCATTTCAAATATATGGGTGCGAGC
TTTGAGTTGTCATTGGTAGGACGATTGGATAAGGAATAA

Protein sequence :
MSLHEESSTTLAPGSTTSLLDEIMSQARMTPENDGYHIAKQGVAAFISSILDTGSNEEPINKLVVDRMIVELDKTLSTQV
DEIMHAKEFQELESSWRSLKLLVDRTDFRENIKINIIHATKEELLEDFEFSPEIIQSGLYKHVYSTGYGQFGGEPVAAVI
GNYAFSNSSPDIKLMQYVSAVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTT
PRFLLRLPYSTVENPIKNFNYQEDVSKDHEHFLWGNTAYLLATCLTDSFAKYRWCPNIIGPQSGGTVSDLPVHLFEAMGQ
IQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNTWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGAS
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 72
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 72
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-155 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_00287 YP_003039126.1 hypothetical protein VFG2093 Protein 0.0 76
PAU_00287 YP_003039126.1 hypothetical protein VFG2475 Protein 1e-165 60