Gene Information

Name : serS (PAU_02841)
Accession : YP_003041672.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 3284437 - 3285726 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence :
ATGCTCGATCCAAACATACTGCGTAATGAGCTAGACGCAGTCGCCGAAAAACTGGCTCGCAGGGGCTATACCCTTGACGT
GGATACGCTGCGCAAACAAGAAGAGCGCCGCAAAGTTTTACAAGTTGAAACTGAAACCCTGCAAGCAGAACGTAATTCTC
GATCGAAAGCTATCGGTGCAGCAAAAGCCCGTGGTGAAAATATTGATCCATTACGTCAGGAAGTGAACCAGTTAGGTGAA
AAGTTGGATACAGCGAAATCCGAACTGGAAAAACTTCAGACTGAAATCCGCGATTTGGCTTTAAATATCCCTAACGTTCC
AGATGACTCTGTACCGGTAGGTAAAGATGAGAATGATAATCTGGAAGTAAGCCGCTGGGGTGAGCCGCGTAAATATGATT
TTGAAGTCAAAGATCATGTTTCATTAGGTGAACTGGCAAATGGATTGGATTTTGCTGCTGCGGTTAAACTGACTGGTTCG
CGTTTTGTGGTGATGAAAGGGCAGATTGCTCGTCTGCATCGTGCCTTGGCTCAATTTATGCTGAACCTTCACACAGAACA
GCACGGTTATTTGGAAACTTACGTTCCTTATCTGGTAAACCATGACACCTTATATGGTACGGGACAGTTGCCAAAATTTG
GTGAAGATCTTTTCCATACTAAGCCGCTGGAAGAAGAAACAGGAAGTCATTACGCGCTAATTCCAACCGCTGAAGTTCCG
GTAACAAATCTGGTCCGTGATGAAATTCTGGATGAAAGCGAATTACCGTTGAGAATGACGGCTCATACTCCGTGCTTCCG
TTCAGAAGCGGGGTCTTATGGCCGTGATACACGCGGTCTGATTCGTATGCATCAGTTTGATAAAGTTGAGTTGGTTCAGA
TTGTGCATCCTGAGGAATCAATGAATGCCCTTGAAGAGCTGACTGGTCATGCAGAGAAAGTGTTGCAATTACTGAATCTG
CCTTACCGTAAAGTTTTACTGTGTACTGGTGATATGGGTTTTGGTGCATGTAAAACGTATGATCTGGAAGTTTGGTTACC
GGCTCAAAACGCTTATCGTGAAATTTCTTCCTGCTCTAACATGTGGGACTTCCAGGCTCGCCGCATGCAAGCGCGTTTCC
GTGGTAAAGAGGACAAGAAGACACAACTGCTCCATACTCTCAATGGTTCTGGTTTGGCGGTTGGCCGTACCTTGGTTGCT
ATTATGGAAAACTATCAGCAAGCCGATGGCCGTATTGAAATTCCAGAAGTATTGCGTCCATATATGGGCGGCTTAGAATA
TATTGATTGA

Protein sequence :
MLDPNILRNELDAVAEKLARRGYTLDVDTLRKQEERRKVLQVETETLQAERNSRSKAIGAAKARGENIDPLRQEVNQLGE
KLDTAKSELEKLQTEIRDLALNIPNVPDDSVPVGKDENDNLEVSRWGEPRKYDFEVKDHVSLGELANGLDFAAAVKLTGS
RFVVMKGQIARLHRALAQFMLNLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEETGSHYALIPTAEVP
VTNLVRDEILDESELPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPEESMNALEELTGHAEKVLQLLNL
PYRKVLLCTGDMGFGACKTYDLEVWLPAQNAYREISSCSNMWDFQARRMQARFRGKEDKKTQLLHTLNGSGLAVGRTLVA
IMENYQQADGRIEIPEVLRPYMGGLEYID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 5e-106 56