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Name : kdsB (PAU_02816) Accession : YP_003041648.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 3255512 - 3256261 bp Length : 750 bp Strand : - Note : - DNA sequence : ATGTTCACAGTTATTATTCCTGCCCGCTTTGCTTCTACCCGTTTACCCGGTAAACCATTAGCTGATATTCACGGTAAGCC AATGATTGTTCGTGTTATGGAGCGAGCTATGCGCTCCGGGGCTAAACGCGTTATTGTGGCAACGGATAATCACGATGTTG TTGCTGCGGTTATTGCTGCGGGGGGAGAGGCTTGTCTGACCAATGAAAATCATCATTCTGGTACCGAACGGTTAGCTGAG GTTATCGATAAATATCAATTTGCTGATGATGAAATTATCGTTAACGTTCAGGGGGATGAGCCATTAATTCCTGAAGAGAT TATTAAACAGGTTGCGGAGAATTTAGCGGGTTGCGACGCGGGAATGGCAACGTTGGCCGTCCAGATTCATCATGCAGAAG AAGCTTTTAACCCCAATGCTGTAAAAGTCGTTATGGATAAACAGGGTTATGCGCTCTATTTCTCCAGGGCGACGATCCCT TGGGAACGTGATCGTTTTATTCGATCGCGGGAAACGATTGGTGATAATTTCCTGCGCCATATTGGTATTTATGCCTATCG TGCAGGTTTTATCCGTCGTTATGTACAATGGGAGCCAAGCCCGTTAGAGCAGATTGAGATGCTGGAACAATTACGAGTAC TTTGGTACGGCGAAAAAATTCATGTGGCAACTGCATTGCAAGCACCGGGAGCGGGGGTTGATACGCCAGAGGATTTAGCC GCGGTCAGAAAGGCGTTTACTGAAATCTGA Protein sequence : MFTVIIPARFASTRLPGKPLADIHGKPMIVRVMERAMRSGAKRVIVATDNHDVVAAVIAAGGEACLTNENHHSGTERLAE VIDKYQFADDEIIVNVQGDEPLIPEEIIKQVAENLAGCDAGMATLAVQIHHAEEAFNPNAVKVVMDKQGYALYFSRATIP WERDRFIRSRETIGDNFLRHIGIYAYRAGFIRRYVQWEPSPLEQIEMLEQLRVLWYGEKIHVATALQAPGAGVDTPEDLA AVRKAFTEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-34 | 42 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-34 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-33 | 42 |
