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Name : pilQ (PAU_02777) Accession : YP_003041610.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : type ii secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3205204 - 3206760 bp Length : 1557 bp Strand : - Note : - DNA sequence : ATGGCAATCACAAGCTCCGATCTGTTGTGTATGGTCAGGCAGGGTGCAAAAGTTTTATCTGCCTTGAATGGTGCACTTGA AATTGAGTTGGCTAACCGCAGTTTGATTTGTCTTGTTGAGTTACCCCAGCAAAAAGGGCAATGCATACTTGCCGTGTCTG CATCCCACAGGCTTGATCCACATGTGCTGGCCTATGAAGAAACGGTGAAAAGACACGGTCTCATCTACCAAATTGTCACT TGTGGCATGGGGAACATATTAGAATTGTACCGTCTTGGTAAGGGGCATTGTCATGGACTGGGAGGTACAGAGTCGGATGT TCAGCGTTATATCATTCGCTTGATCGGCGAAGCGACTGAGGAGCGTGCGTCAGATTTACATATTGTTGCTCGCTACAATT ATTGTGAAATCCGTTGTCGTATTGATGGTCATTTACGACCAATAGGACAACTGCGTCCGGCAGAAGGGTTACGATTATGC GCGACTATCTATCAAAGTATGTGTGATGTGGCCGAACCGACTTTTAAGCCGATGCAGGCACAGCGCGCGCGAATGAAGGA TGAATTCCTGACCGAATGCGGACTTTCCGGGGCGCGTATTAATACTCGTCCACTCGATCGGGGCATGTTGATGGTATTGC GATTGTTGTATGCGGACAGCCCCGGAACGATGTGTACCCTAAGCGACCTTGGTTATTTGCCCGAACAGTGTCAGATACTG GAAGAATTGATGGACCATCGGACCGGTGTAGTCCTCTTGTCTGGTGCGACTGGTAGTGGGAAGAGCACCACCTTGAAAGT CGTAATGCAAAAGATGATAGCCGAACAAGCTGGCATTCATCTACTCACGCTTGAAGATCCACCTGAATATGAGATAGCCG GTGCTAATCAATCCCCCATAACCGGTGATCGAGGTGATAGCGTCGTGGTCGAACAAGAATGGGCAATGGCGATTGCTGAT GCAATGCGACTCGATCCTGATGTGATTATGGTTGGTGAGATACGCGACGCAGTGACTGCAAAGATGACATTTCGGGCAGC AATGACGGGCCATCTTATCTGGACTACGATCCATGCAAACGATGCTTTGGCGATCTTGCCCCGCTTGCAGGACGAGGCGG TGATGGAGTCGTTATTGATGGATTCGCGGCTAGTGATTGGTTTGGTTAATCAATCGCTGATCCAGGTGTTATGCCCTCAC TGTAAAGTCCCCCTGAAAGGGCATGAATGGGAAGTTTCTGAGCGTCTATTGAAACGATTGAATCTTTACTGCCAGTCGGA ATCGGTCTGTCTACAGGGAGCTGGCTGTGATTTTTGCAAGCAGAGCGGCATTTTGGGCCGAACAGTCGTTGCTGAAGTGG TACGCACTTCCCCCGGCTTGATGCAGGCCTATCGAATGGGTCACCACCATGGAGCGACCCGATATTGGATTTCAGAGATG GGGGGATTAAGCAAGGTTGATGCACTCATTTGCAAAATAAATGACGGAATCATCGATCCCCGTGCGGCAGAACGTGTGAT GGGCCCGATTATTCCTGCGATCCATCAAATAGAGTGA Protein sequence : MAITSSDLLCMVRQGAKVLSALNGALEIELANRSLICLVELPQQKGQCILAVSASHRLDPHVLAYEETVKRHGLIYQIVT CGMGNILELYRLGKGHCHGLGGTESDVQRYIIRLIGEATEERASDLHIVARYNYCEIRCRIDGHLRPIGQLRPAEGLRLC ATIYQSMCDVAEPTFKPMQAQRARMKDEFLTECGLSGARINTRPLDRGMLMVLRLLYADSPGTMCTLSDLGYLPEQCQIL EELMDHRTGVVLLSGATGSGKSTTLKVVMQKMIAEQAGIHLLTLEDPPEYEIAGANQSPITGDRGDSVVVEQEWAMAIAD AMRLDPDVIMVGEIRDAVTAKMTFRAAMTGHLIWTTIHANDALAILPRLQDEAVMESLLMDSRLVIGLVNQSLIQVLCPH CKVPLKGHEWEVSERLLKRLNLYCQSESVCLQGAGCDFCKQSGILGRTVVAEVVRTSPGLMQAYRMGHHHGATRYWISEM GGLSKVDALICKINDGIIDPRAAERVMGPIIPAIHQIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilQ2 | AAP84207.1 | PilQ2 | Virulence | PAPI-1 | Protein | 3e-88 | 43 |
| pilQ | CAI36062.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 2e-85 | 41 |
