Gene Information

Name : PAU_02462 (PAU_02462)
Accession : YP_003041297.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Resistance
Product : putative abc transporter atp-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2815107 - 2815769 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAGCATGATGAATGTCTGTAAATCATATAAAACGAAGTTCATTCAGACAAATGTTTTGAATGAAATAAATCTCAA
TATAGATAAAGGTGAATTTATTTCTATAATGGGAGCGTCTGGATCAGGTAAATCAACATTATTGAATGTTATTGGCATGT
TCGAGACGATCGATAGTGGTCAATTAACACTGAATAATAATAATATTTTAAAGATGAAATATTCCGATAAAATATCATTT
AGACGAGAATTTATTGGATATATTTTTCAATCATTCAATCTGTTACCCAATCTAACTGTATTCGAAAATATAGAATTACC
TTTGAAATATAGAGGTTTTTCTAAAAAACAGAGAAAAAATAAAGTACTTGATGCAATAAATAATTTTGGATTAGAAAATC
GGGGAAATCATAAACCGATACAATTATCTGGCGGACAACAGCAACGTGTCGCTATCGCCAGAGCAATGATCTCAAACCCC
GCGATTTTATTAGCTGATGAACCAACGGGGAATCTGGATAGCACAAATGGCCAGAATATTTTGTCTTCACTTAAAGATCT
GAATGAAAACGGCACGACTATTGTGATGGTAACCCATTCCGTAGAAGCCGCTGCATTTTCTGACAGAATATTAACGATGA
AGGATGGCCATTTGCTTGTTTGA

Protein sequence : 
MISMMNVCKSYKTKFIQTNVLNEINLNIDKGEFISIMGASGSGKSTLLNVIGMFETIDSGQLTLNNNNILKMKYSDKISF
RREFIGYIFQSFNLLPNLTVFENIELPLKYRGFSKKQRKNKVLDAINNFGLENRGNHKPIQLSGGQQQRVAIARAMISNP
AILLADEPTGNLDSTNGQNILSSLKDLNENGTTIVMVTHSVEAAAFSDRILTMKDGHLLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_02462 YP_003041297.1 putative abc transporter atp-binding protein NC_008702.1.4606598. Protein 6e-43 48
PAU_02462 YP_003041297.1 putative abc transporter atp-binding protein NC_012469.1.7686878. Protein 7e-45 46
PAU_02462 YP_003041297.1 putative abc transporter atp-binding protein CP001581.1.gene798.p Protein 9e-37 44
PAU_02462 YP_003041297.1 putative abc transporter atp-binding protein CP001581.1.gene598.p Protein 4e-37 44