Gene Information

Name : yopT (PAU_02096)
Accession : YP_003040932.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : cysteine protease
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.22.-
Position : 2355882 - 2356856 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGGAACGTGAATATAATAAGAAAGAAAAACAGAAAAAGTCAGCAATTAAGTTGGATGATGCTGTTGGAAATAATGAGGA
AAACATGGATATGACTAGCCCATTGGAACTTAATTCTCAATACACTAATAGAAAAAGGCCGGGGTTACGCGAGCGTTTTT
CGGCCACTCTGCAACGTAACCTACCAGGCCATTCTATGCTCGATCGGGAGCTAACCACCGATGGTCAAAAAAACCAAGAG
AGTCGATTCTCCCCTGGCATGATAATGGATAGGATCATGCATCTCGGGGTCAGGACCCGATTAGGGAAAGTTCGAAATTC
GGCAAGTAAATACGGGGGTCAAGTCACCTTCAAATTTGCCCAAACCAAAGGTACCTTCCTGGACCAAATCATGAAACACA
AAGACACCTCAGGCGGTGTCTGTGAGTCTATATCTGCTCACTGGATAAGCGCCCATGCCAAAGGTGAAAGCATCTTCGAT
CAACTCTATGTCGGGGGCCAAAAAGGAAAATTTCATATCGACACGTTGTTTTCCATTAAGCAGTTACAGATGGACGGCTA
TCTGGATGATGAACAAAGTACAATGACAGAGTACTGGCTTGGTACACAAGGCATTCAACCAAACAGGCAAAAAAATGACA
ACATGAACGAACACTCATCCAAGATAGTGGGTGAAACCGGTACCAGAGGTACAAAAGACCTATTACGCGCTATTCTGGAT
ACGGGTGATAAAGGATCAGGCTACAAGAAGATCAGTTTTCTCGGAAAAATGGCTGGACATACTGTCGCTGCCTATGTAGA
TGACCAGAAAGGTGTCACTTTTTTTGATCCCAACTTCGGTGAATTCAACTTTCCGGATAAAGTCTCATTTTCTCACTGGT
TTACTGACGATTTTTGGCCAAAATCTTGGTACAGCCTGGAAATCGGTCTGGGGCAAGAATTTGAAGTCTTCAACTATGAG
CCTAAAGAACCCTAA

Protein sequence : 
MEREYNKKEKQKKSAIKLDDAVGNNEENMDMTSPLELNSQYTNRKRPGLRERFSATLQRNLPGHSMLDRELTTDGQKNQE
SRFSPGMIMDRIMHLGVRTRLGKVRNSASKYGGQVTFKFAQTKGTFLDQIMKHKDTSGGVCESISAHWISAHAKGESIFD
QLYVGGQKGKFHIDTLFSIKQLQMDGYLDDEQSTMTEYWLGTQGIQPNRQKNDNMNEHSSKIVGETGTRGTKDLLRAILD
TGDKGSGYKKISFLGKMAGHTVAAYVDDQKGVTFFDPNFGEFNFPDKVSFSHWFTDDFWPKSWYSLEIGLGQEFEVFNYE
PKEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18078.1 putative type III secreted effector LopT Not tested TTSS locus Protein 5e-95 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yopT YP_003040932.1 cysteine protease VFG0375 Protein 2e-70 51