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Name : topB (PAU_01982) Accession : YP_003040818.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : DNA topoisomerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2218297 - 2220225 bp Length : 1929 bp Strand : + Note : - DNA sequence : ATGCGGCTTTTTATTGCAGAAAAACCAAGTTTGGCCAGGGCGATTGCAGATGTTCTACCTAAACCGCATCGCCGTGGTGA TGGCTTTATTGCTTGTGGGGATAACCAATTTGTTACCTGGTGCATTGGGCATTTACTGGAGCAGGCAGAACCTGATGCCT ATGACAGTCGCTTTGCTCGTTGGTCATTGGTTGATCTTCCTATTGTTCCTGAAAAATGGCAGTTAAAACCTCGCCCCTCT GTGGCGAAGCAACTGGATATCATTCAGGAATTGTTGAAAAAAGCAGATGAAGTGGTACATGCTGGTGACCCGGATCGTGA AGGGCAACTGTTGGTGGATGAGGTGTTGGATTTTTTGAATCTGGATGGTGAAAAGAGGAAAAATGTTCGCCGTTGTCTGA TAAATGATCTAAATCCACAAGCAGTTGCTAAAGCGGTTGACCGGTTGAGAGATAACCGGGATTTTATTCCGCTATGCGTT TCTGCTCTCGCCAGAGCCAGAGCTGATTGGCTGTATGGTATAAACATGACTCGGGCTTACACCTTGCTTGGACGCAATGC CGGGTATCGGGGCGTATTATCTGTTGGGCGGGTTCAGACACCTGTTTTGGGATTAGTTGTTCGCCGGGATGAAGAAATTG AGCATTTCGTACCAAAAGACTTTTTTGAGGTGAAAGCTCATATTGTTACGCCGAAAGATGAACGTTTTACCGCGATTTGG CAGCCAAGTGAATCTTGTATCGATTTTCAGGATGAAGAAGGTCGATTGATACACCGGCCTCTGGCTGAACATGTTGTTGC CAGAATAACTGGTCAGCCAGCCTATGTGACGTCGTATCAGGATAAACGGGAATCTGAAGTTGCACCTTTGCCGTTTTCAT TATCCTCATTGCAAATTGAGGCAGCTAAACGCTTTGGTTTGAATGCGCAACAAATATTGGATATTTGTCAGCGGTTATAT GAAACGCATAAATTGATTACTTATCCCCGTTCTGATTGTCGTTATTTGCCTGAAGAGCATTTTGCCGGGCGTCATGCAGT GCTTAATGCGATATCTGTTCACACAATAAATCTGTTACCTCAGGATCTACTGGAAGTAGATAGAAAGAATCGTTGTTGGG ATGATAAAAAGGTTGATGCTCATCATGCAATTATTCCTACTGCACGAAATAGCCATATAAATCTGACAGACAATGAAGCT AATATTTATGGTTTGATTGCCAGACAATATTTGATGCAGTTTTTCCCAGATGCGATATTCCGAAAATGTGTTATTGAATT GGAAATTGCTGGTGGAAAATTTATAGCTAAAGCTCGTTTTCTTGCTGAAGCAGGTTGGAGAACATTGCTTGGTAATAAGG AACGCGATGAAGAAAACGACGGAACACCATTACCCGTGGTTGCTAAAGGTGATGAGTTATTGTGTGAAAGAGGAGAAGTG GTGGACCGCCAGACGCAACCGCCAAAGCCATTTACTGATGCGACCATCCTTTCTGCTATGACTGGAATCGCTCGTTTTGT ACAGGATAAGGAGCTAAAAAAAGTTCTGCGGGCAACAGATGGATTAGGGACTGAAGCAACGCGGGCTGGCATTATCGAAT TGTTATTTAAACGGGAATTTCTTTATAAAAAAGGACGTTATATTCATGCAACGCCAGCGGGTAGGGCGTTGATTCATGTC TTGCCTGATATAGCTGCTTTACCGGATATGACGGCACATTGGGAATCTCGGTTAACGCAAATCAGTGAGAAACAGTTCCG CTACCAGGATTTCATGAAGCCGCTTGAGGAGACATTGCAGCAGTTAATCTGGCAAGCTAAGCAGAGCCGTAATTTGCAAG CTTTCCGTGATTTACCTCCTGTCCCGGTTAAAGGTAAAAACGGGAAAAAATCAAAATCAGGGAAAAACACTAAAGCAACT GCGCCGTAG Protein sequence : MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGDNQFVTWCIGHLLEQAEPDAYDSRFARWSLVDLPIVPEKWQLKPRPS VAKQLDIIQELLKKADEVVHAGDPDREGQLLVDEVLDFLNLDGEKRKNVRRCLINDLNPQAVAKAVDRLRDNRDFIPLCV SALARARADWLYGINMTRAYTLLGRNAGYRGVLSVGRVQTPVLGLVVRRDEEIEHFVPKDFFEVKAHIVTPKDERFTAIW QPSESCIDFQDEEGRLIHRPLAEHVVARITGQPAYVTSYQDKRESEVAPLPFSLSSLQIEAAKRFGLNAQQILDICQRLY ETHKLITYPRSDCRYLPEEHFAGRHAVLNAISVHTINLLPQDLLEVDRKNRCWDDKKVDAHHAIIPTARNSHINLTDNEA NIYGLIARQYLMQFFPDAIFRKCVIELEIAGGKFIAKARFLAEAGWRTLLGNKERDEENDGTPLPVVAKGDELLCERGEV VDRQTQPPKPFTDATILSAMTGIARFVQDKELKKVLRATDGLGTEATRAGIIELLFKREFLYKKGRYIHATPAGRALIHV LPDIAALPDMTAHWESRLTQISEKQFRYQDFMKPLEETLQQLIWQAKQSRNLQAFRDLPPVPVKGKNGKKSKSGKNTKAT AP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-100 | 41 |
