Gene Information

Name : tpx (PAU_01957)
Accession : YP_003040793.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : thiol peroxidase (scavengase p20)
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 2193703 - 2194206 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGACACAAACAGTAAAATTTCAGGGCAATGATATTTCCGTCAGTGGCCAATTCCCAAAATCAGGGGAAAAAGCGAAAGA
TTTTACTCTAACAGCCAAAGATCTCTCCGATATTTCCCTCGGCCACTATGCTGGAAAACGTAAGGTATTGAATATCTTTC
CAAGCATTGATACCGGTGTTTGTGCTGCATCAGTACGTAAATTTAATCAGGTAGCAAATGACCTGGAGAATACTGTTGTC
CTATGCATTTCTGCTGACCTACCTTTTGCACAGTCCCGTTTCTGCGGTGCGGAAGGATTATCAAATGTTGTCACTCTTTC
TACTCTGCGTGGCGATACTTTCAGTAAAGATTATGGCGTGGCTATCAGCGACAGCCCTCTGAGAGGTCTTACAGCTCGTG
CAGTAGTTGTACTTGATGAAAGCGATAAAGTGATTTACAGCCAATTGGTTGATGAAATTACTAATGAGCCAGATTACGAC
AGCGCACTCGCTGTACTGAAATAA

Protein sequence : 
MTQTVKFQGNDISVSGQFPKSGEKAKDFTLTAKDLSDISLGHYAGKRKVLNIFPSIDTGVCAASVRKFNQVANDLENTVV
LCISADLPFAQSRFCGAEGLSNVVTLSTLRGDTFSKDYGVAISDSPLRGLTARAVVVLDESDKVIYSQLVDEITNEPDYD
SALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-36 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-36 50
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 5e-36 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-36 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003040793.1 thiol peroxidase (scavengase p20) VFG0087 Protein 7e-37 50