Gene Information

Name : PAU_01893 (PAU_01893)
Accession : YP_003040729.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Resistance
Product : right origin-binding protein-transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2124147 - 2124509 bp
Length : 363 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGAAATTGTAGTAAACGATATTATCCGGTGGCTCGAAACTCAGCTTCAACGTAACGAAGGTATAAAAATAGAGAC
TATTGCCGACAAAAGTGGTTACTCAAAGTGGCACCTGCAAAGAGTGTTTAAAGAGGTAAAAGGTTGTACCTTAGGTGAAT
ACGTTCGCAAACGGCGTTTACATGAGGCGGCAAGATCTCTACGTGAAGGAAATATGCCAATCCTTGATATTGCCTTACAG
TATGGTTTCAGCTCTCAGGCAACATTTACTCGAATCTTCAAGAAACATTTTAATACCACACCTGCCAAATTCAGAGAGAA
TGGTCACCTACCTGAATTAAAGTACTTCTTAGGTTATGAGTGA

Protein sequence :
MSEIVVNDIIRWLETQLQRNEGIKIETIADKSGYSKWHLQRVFKEVKGCTLGEYVRKRRLHEAARSLREGNMPILDIALQ
YGFSSQATFTRIFKKHFNTTPAKFRENGHLPELKYFLGYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-20 46
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-20 46
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 3e-21 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP001138.1.gene612.p Protein 2e-23 48
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator NC_010558.1.6276025. Protein 2e-20 46
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator NC_002695.1.914293.p Protein 3e-22 45
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP001138.1.gene4488. Protein 9e-22 45
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP000034.1.gene4505. Protein 5e-22 45
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator BAC0371 Protein 3e-22 45
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP001918.1.gene327.p Protein 2e-22 44
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP001918.1.gene2033. Protein 4e-23 44
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP000647.1.gene4499. Protein 6e-22 43
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP001138.1.gene1637. Protein 2e-23 43
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP000647.1.gene1624. Protein 3e-23 43
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator BAC0560 Protein 9e-23 42
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator NC_002695.1.917339.p Protein 9e-23 42
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator CP000034.1.gene1596. Protein 8e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator VFG1038 Protein 2e-20 46
PAU_01893 YP_003040729.1 right origin-binding protein-transcriptional regulator VFG0585 Protein 8e-22 45