Gene Information

Name : PAU_01864 (PAU_01864)
Accession : YP_003040700.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : iron (chelated) abc transporter, periplasmic-binding protein yfea
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2094016 - 2094930 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAAAAAACTTTCTCTGCTCCCTTCTCCCATACTGGGAATGACTTTGATTCTCCTATCTATAGTTTTATTCAGCCA
GCAAGTATCTGCCACTAAAAAATTCAAAGTCGTCACCACCTTTACTATCATTCAGGATATAGCACAAAATGTAGCAGGTG
ATGCTGCAATTGTTGAATCAATTACTAAACCAGGCGCTGAAATCCATGATTATCAACCTACCCCCAAAGATATTATTAAG
TCCCAACATGCTGATTTGATTCTATGGAATGGATTGAATTTGGAACGCTGGTTTGAGCGCTTCTTTGAAAATCTCAAAGA
TATACCAGCAGTTGTTATTACTGACGGCATTCTACCATTACCTATCCGTGAAGGACCTTATAACGGAAATCCTAACCCTC
ACGCATGGATGTCGCCAACAAACGCCTTGGTCTATATTGAAAATATTCGCAAAGCATTTGTGAAATATGATCCTGAAAAT
GCAGAAAGTTATAATAGGAACGCCAAAGCCTACGCTGAAAAAATCGCAAAACTCGATTCTCCATTGAGAGAGCGTCTTTC
CCGTATTCCACAGGATCAACGTTGGCTAGTTACCAGTGAAGGTGCTTTCAGTTATCTGGCTAAGGATTATCAACTCAAAG
AAGTTTATCTGTGGCCAATCAATGCAGAAGAACAAGGCTCGCCACAACAAGTTCGTCATGTCATTGATACTGTAAGAGCA
AATAAAATCCCAGTTGTATTTAGCGAAAGTACAATTTCTGATAAACCAGCCAAACAAGTCAGTAAAGAAACTGATGCCCG
TTATGGTGGTGTTCTTTATGTAGACTCACTCTCTGGTAGTGACGGTCCAGTACCAACGTATATTGATTTGTTGAACAAAA
CCGTAGATACAATAGCAAAAGGATTTAATCAATGA

Protein sequence : 
MKKKLSLLPSPILGMTLILLSIVLFSQQVSATKKFKVVTTFTIIQDIAQNVAGDAAIVESITKPGAEIHDYQPTPKDIIK
SQHADLILWNGLNLERWFERFFENLKDIPAVVITDGILPLPIREGPYNGNPNPHAWMSPTNALVYIENIRKAFVKYDPEN
AESYNRNAKAYAEKIAKLDSPLRERLSRIPQDQRWLVTSEGAFSYLAKDYQLKEVYLWPINAEEQGSPQQVRHVIDTVRA
NKIPVVFSESTISDKPAKQVSKETDARYGGVLYVDSLSGSDGPVPTYIDLLNKTVDTIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 8e-88 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 8e-88 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 6e-88 65
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-87 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 8e-88 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01864 YP_003040700.1 iron (chelated) abc transporter, periplasmic-binding protein yfea BAC0439 Protein 5e-105 82
PAU_01864 YP_003040700.1 iron (chelated) abc transporter, periplasmic-binding protein yfea BAC0349 Protein 4e-88 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01864 YP_003040700.1 iron (chelated) abc transporter, periplasmic-binding protein yfea VFG0525 Protein 4e-88 65