Gene Information

Name : PAU_01863 (PAU_01863)
Accession : YP_003040699.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : iron transport system atp-binding protein yfeb
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2093123 - 2094019 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGCAGTAAGCCGTTTGAACGTCCTCATTTAGTGGTTGATGATGCCACTGTAACTTACAACAACGGTCACACCGC
TATTTATGATGCAAGTTTCTCCATCACTGGCGGTACTATCTGTGCGTTAGTTGGTATTAACGGTAGCGGTAAGTCCACAT
TGTTTAAGACTATTATGGGTCTGGTAAACCCATCTCAAGGGAAAGTTACCCTGAGCAATATGCCTGTTAAAAGCGCTTTA
AAGAAAAATATCATTGCATATGTACCGCAGACAGAAGAAGTTGACTGGAACTTTCCAGTACTGGTTTCCGATGTTGTTAT
GATGGGCCGCTACGGCAAAATGGGATTTTTGAGAATCCCAGGTAAAAAAGATCACCAAACTGTTGATGAAGCTCTTGAAC
GCGTTGGCTTAACTGCCCTACGCAATCGGCAGATTGGTGAACTTTCAGGCGGACAGAAAAAACGGGTTTTTCTTGCAAGG
GCTCTGGCTCAAGAAGGAAAAGTTCTATTACTGGATGAACCTTTCACCGGTGTTGACGTAAAAACAGAAAATGCCATCAT
CGACTTACTGTGTGATTTACGCGATGAAGGCCATCTGGTGCTGGTTTCAACACACAATCTCGGTAGTGTGCCTGAATTCT
GTGACCATGTTATCCTGATCAACCGGACTGTTCTGGCCAGTGGCCCAACAGAAACAACATTCACTCAAAAGAATTTAGAG
AGGACTTTTGGTGGAGTGCTTCGCCACATCAATCTATCTGGATCAGAATTACATGATGACGATGACCCACGTTCTCTAAC
TGTTATTACTGATGATGAACGTGCAGCAGTCTTTTATGGTCATAACCATCATATTCCGCCGCGGCAAACTCAGCAAAAGG
AGAAACGCCAACCATGA

Protein sequence : 
MNSSKPFERPHLVVDDATVTYNNGHTAIYDASFSITGGTICALVGINGSGKSTLFKTIMGLVNPSQGKVTLSNMPVKSAL
KKNIIAYVPQTEEVDWNFPVLVSDVVMMGRYGKMGFLRIPGKKDHQTVDEALERVGLTALRNRQIGELSGGQKKRVFLAR
ALAQEGKVLLLDEPFTGVDVKTENAIIDLLCDLRDEGHLVLVSTHNLGSVPEFCDHVILINRTVLASGPTETTFTQKNLE
RTFGGVLRHINLSGSELHDDDDPRSLTVITDDERAAVFYGHNHHIPPRQTQQKEKRQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-82 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-83 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-83 67
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 8e-82 67
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 8e-82 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01863 YP_003040699.1 iron transport system atp-binding protein yfeb BAC0440 Protein 4e-117 81
PAU_01863 YP_003040699.1 iron transport system atp-binding protein yfeb BAC0350 Protein 2e-83 67
PAU_01863 YP_003040699.1 iron transport system atp-binding protein yfeb BAC0400 Protein 5e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01863 YP_003040699.1 iron transport system atp-binding protein yfeb VFG0526 Protein 2e-83 67