Gene Information

Name : yfeC (PAU_01862)
Accession : YP_003040698.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein yfec
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2092251 - 2093126 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
ATGATAGAACTTTTGCTGCAACCTTTTCACTATAACTACATGGTAAAAGCTATCTGGGTTAGTGCTATCGTCGGTGCCGT
CTGTGCCTTTCTTTCCGCCTATCTGATGCTAAAAGGCTGGTCATTGATGGGAGATGCACTCTCTCACTCGGTTGTACCTG
GTGTCGCCGGTGCTTACGCACTGGGTCTTCCTTATGCTGGTGGCGCTTTTTTTACCGGCATGTTGGCAGCCCTGTCGATG
ACTCTTGTTCGTCATATTACTCGCTTACGCGAAGATGCGGTGATCGGATTTATATTTTCTACCTTCTTTGCTGCCGGCTT
ATTAATAGTTTCTCTCAATCCAACATCTGTTAACGTACAAACCATTATTCTTGGCAATATTCTTGGTATCGCTGATGAAG
ATGTTCTTCAAGTTGAAATCATCATTACAGTTTCATTGATCGTGTTAATGTTTATCTGGAAAGATTTACTCGTTGTGTTC
TTCGATGAAACTCATGCACGTTCTATTGGCCTATCGCCCTTGAGGATGAAAATTATTTTTTTTACTTTATTAAGCGCATG
TACAGTCGCAGCCTTACAAACTGTTGGCGCTATTTTAGTAATTGCAATGGTAGTGACTCCAGGTGCAACAGCTTATTTGC
TGACTGACCGTTTTAAACGCTTACTGATAATTGCTATTGCCATTGGTGTCCTAACTAGTGCATTTGGCGCTTACTTAAGT
TTCTTTCTCAATGGTGCTACCGGTGGCGTCATTGTCACGCTTCAAACAGTTATTTTCTTATTGACGTTCTTCCTTGCACC
AAAACACGGGCTATTCGCTTCTCGTATACGTGCCAGAAAAGAATCCTCAGCATTAGCGAAGGAGACGCAATCATGA

Protein sequence : 
MIELLLQPFHYNYMVKAIWVSAIVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAGGAFFTGMLAALSM
TLVRHITRLREDAVIGFIFSTFFAAGLLIVSLNPTSVNVQTIILGNILGIADEDVLQVEIIITVSLIVLMFIWKDLLVVF
FDETHARSIGLSPLRMKIIFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDRFKRLLIIAIAIGVLTSAFGAYLS
FFLNGATGGVIVTLQTVIFLLTFFLAPKHGLFASRIRARKESSALAKETQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-77 66
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-77 66
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-77 66
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-77 66
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-77 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_003040698.1 chelated iron transport system membrane protein yfec BAC0441 Protein 1e-98 88
yfeC YP_003040698.1 chelated iron transport system membrane protein yfec BAC0351 Protein 3e-77 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_003040698.1 chelated iron transport system membrane protein yfec VFG0527 Protein 3e-77 66