Gene Information

Name : lolD (PAU_01727)
Accession : YP_003040563.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1952180 - 1952884 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAGTCGACCATTACTGTTGTGTAATAATCTGTGTAAAAAATATCAGGAAGGGCAGGTACTGACCGAAGTACTGAA
AAATGTCACCTTTTCTATTAATCGGGGCGAAATGATGGCGATTGTAGGAAGCTCGGGGTCAGGTAAGAGTACGCTTCTGC
ATTTGCTTGGTGGGTTGGATACACCGACTTCTGGTGAAGTCCTATTTAAGGGACAGTCTCTGAATAAAATGTCTTCCAGA
GCCAGAGCAGAATTGCGTAATCATGAATTAGGCTTTATTTATCAGTTTCACCATCTATTGCCAGATTTTAATGCGATAGA
AAATGTGGCTATGCCACTACTGATTGGTGGCAAAAATCGGGATCAAGCACAGAGGAAGGCGTTAGAAATGCTGGCTGCTG
TTGGTCTGGAGAAACGAGTTTATCACCGCCAGTCGGAATTATCGGGTGGTGAACGTCAGCGTGTGGCGATTGCCAGAGCA
TTAGTGAATGAGCCCTCTTTAGTTCTGGCTGATGAACCAACTGGCAACCTTGATTTACGTAATGCAGATAGCATTTTTGA
ATTATTGGGCGAGCTTAACCGGCAGCAAGGTACTGGGTTTCTGGTAGTCACCCATGATTTGAAACTTGCCGACAGATTGG
ATCGCCAGGTAGAGATGCGTGATGGTTATTTGCAAGATGAATTGACCCTGACGGGGGCAATGTAA

Protein sequence : 
MNSRPLLLCNNLCKKYQEGQVLTEVLKNVTFSINRGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGEVLFKGQSLNKMSSR
ARAELRNHELGFIYQFHHLLPDFNAIENVAMPLLIGGKNRDQAQRKALEMLAAVGLEKRVYHRQSELSGGERQRVAIARA
LVNEPSLVLADEPTGNLDLRNADSIFELLGELNRQQGTGFLVVTHDLKLADRLDRQVEMRDGYLQDELTLTGAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-26 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003040563.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 3e-38 44
lolD YP_003040563.1 lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 5e-33 44
lolD YP_003040563.1 lipoprotein-releasing system ATP-binding protein CP001581.1.gene798.p Protein 2e-37 41