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Name : PAU_01621 (PAU_01621) Accession : YP_003040457.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : similar to hcp protein Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 1847287 - 1847766 bp Length : 480 bp Strand : + Note : Virulence protein Hcp1 from Pseudomonas aeruginosa. Hcp1 appears to be part of a protein secretion apparatus that is required for virulence. DNA sequence : ATGGCGAATATAATCTATTTGGAAATTAAGGGTGATAAGCAAGGGCTGATATCACAAGGATGTTCAACGGTTGATTCTAT TGGTAACACATGTCAGCTTGGTCATGAAGACAATATATTTGTTTATGAATTGACTTCCAATATAACCAGAGGTCAACATG TTAACCATCAACCGGTTGAGATAAGAAAGCCAATAGATAAGTCTTCTCCTCTTTTGGGATTAGCTATAACCAATAAAGAA TCGCTACAATGTATTTTTTATTTTTACAGAACATCAAGTAAAGGTGGTTTAGAACTTTATTATAAGATAAAACTCACTGG CGCATATATATGTGGATTGAATGGTTTTTATCCAAATTCATCTACGCATAATGAGTGTCAGCCTCAGGAAAGTTTATCTT TAATGTATCAGTCAATCACGTGGGAACATGTTATGTCTGGCACAAGTGCATATAGCATATGGGAAGATAACGTTTATTGA Protein sequence : MANIIYLEIKGDKQGLISQGCSTVDSIGNTCQLGHEDNIFVYELTSNITRGQHVNHQPVEIRKPIDKSSPLLGLAITNKE SLQCIFYFYRTSSKGGLELYYKIKLTGAYICGLNGFYPNSSTHNECQPQESLSLMYQSITWEHVMSGTSAYSIWEDNVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 2e-37 | 51 |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 9e-35 | 49 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 6e-35 | 49 |
