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Name : treC (PAU_01358) Accession : YP_003040195.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1543131 - 1544792 bp Length : 1662 bp Strand : + Note : - DNA sequence : ATGGACAAAATCATTCCATGGTGGTTACAAGGTGTCATCTATCAGATATATCCTAAAAGTTTCCAGGATACGACTGGTAG TGGAACCGGTGATCTTAACGGCATTACTTACCGGCTTGATTATTTGAAAAAACTGGGCATAGACGCTATTTGGGTGACCC CTTTTTACCTCTCACCACAGGTAGATAATGGTTATGATGTTGCTGATTATTATTCTATTGATCCAGCTTATGGATCAATG GATGATTTTAAGCGTTTGGTTAATGAAGCACATCAACGTGATATCCGTATTATCGTGGATATTGTTTTCAACCATACATC GACTCAACACCCTTGGTTCAAACAAGCACAAGATATTAATAGCCCTTACCGGCAGTATTACATCTGGCGGGATGGGATAC CGGGGACACCGCCTAATAATTGGGTGTCAAAATTTGGCGGGAATGCCTGGGAGTGGCACGAGGAAAGCAAACAGTATTAT TTACACCTGTTTGCCGCTGAGCAGGCGGACCTAAACTGGGAGCATGAGCCAGTACGAGCTGAACTTAAAAAGATTTGTGA ATTTTGGGCTGATCTTGGCGTTGATGGGTTCCGTCTGGATGTTATTAATTTGGTTTCCAAGCAGCAGGATTTCCCTGAAG CAACAGAGGGAGATGGGCGCCAGTTCTATACCGATGGTCCGCGTATTCATGAATTTTTGCAGGAAATAAACAGAGAGGCA TTCCAGCCTGCGGGGGTAATGACTGTAGGAGAAATGTCTTCTACTTCCCTAGAAAATTGCCAGCGTTACTCCTCGTTAGA TGGTGAAGAGCTATCGATGGTTTTTGCCTTTCATCATTTGAAAGTCGATTACCCTAATGGCGAAAAATGGGTGACAGCAT CACCTGATTTTATTGAGCTGAAGAAAATTTTTACTAAGTGGCAGCAAGGAATGCATAAACGGGCGTGGAATGCGCTGTTC TGGTGTAATCACGATCAACCGCGGATTGTTTCGCGTTTTGGTGGTGAAGGGGCATTGCGGGTTCCATCTGCCAAAATGTT AGCAATGGTGTTGCATGGTATGCAGGGAACTCCTTACATCTATCAAGGGGAAGAATTGGGAATGACTAACCCGAACTTTT CTCAAATTGAAGATTACCGGGATATAGAAAGCTTAAATATTTATCAGGAGAAGATTGGGCAGGGCGGCGATAAAGAAAAA ATCTTGTCGATCCTGGCGAAGAAATCTCGTGATAATGGGCGAACGCCGATGCAATGGGATGCAACTCATCATGCAGGATT TACGCAGGGTGAGCCGTGGATCGCGCTGAATAGTGATTACAGGGAAGTGAATGCTGAAAACGCTATGCAGGATAGTGATT CGGTTTTTCATTGTTATGCACGCTTAATAAAGCTACGTAAAGAATATCCTGTATTGACTTATGGCAGCTATGAAGACTTA TTGCCGTCTCATCCTTCCCTTTGGTGTTATGTTCGTCGTTGGGAAAGTCAAACGTTACTGGTTATCGCCAATCTCAGCGC GGAAGTACAAGAATGGTCACTGGATGCTTCTTTATCCCATTGTTCGTGGGTTAAGTTAATGGGGAACTATCCTGAATCCC CGCTACCTGCAAAAAACATACAATTACAGCCTTATGAAGCCGTTTATTGGTTGGCGGAATAA Protein sequence : MDKIIPWWLQGVIYQIYPKSFQDTTGSGTGDLNGITYRLDYLKKLGIDAIWVTPFYLSPQVDNGYDVADYYSIDPAYGSM DDFKRLVNEAHQRDIRIIVDIVFNHTSTQHPWFKQAQDINSPYRQYYIWRDGIPGTPPNNWVSKFGGNAWEWHEESKQYY LHLFAAEQADLNWEHEPVRAELKKICEFWADLGVDGFRLDVINLVSKQQDFPEATEGDGRQFYTDGPRIHEFLQEINREA FQPAGVMTVGEMSSTSLENCQRYSSLDGEELSMVFAFHHLKVDYPNGEKWVTASPDFIELKKIFTKWQQGMHKRAWNALF WCNHDQPRIVSRFGGEGALRVPSAKMLAMVLHGMQGTPYIYQGEELGMTNPNFSQIEDYRDIESLNIYQEKIGQGGDKEK ILSILAKKSRDNGRTPMQWDATHHAGFTQGEPWIALNSDYREVNAENAMQDSDSVFHCYARLIKLRKEYPVLTYGSYEDL LPSHPSLWCYVRRWESQTLLVIANLSAEVQEWSLDASLSHCSWVKLMGNYPESPLPAKNIQLQPYEAVYWLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-121 | 44 |
