|
Name : ygiK (PAU_00124) Accession : YP_003038963.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : similar to dicarboxylate transport system Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 134930 - 136231 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGGATTGGCAAGTTGTTTTAGTTTTGTTCGGTAGTTTCGCGATATTACTGGCACTTGGTATCCCGGTATCCTTTGCGAT TAGTTTGTCATCATTACTGGCCATTATGATGACGCTTCCCATAGAAGCGGCTGTTACTGTTGTTGCTCAACGTATGGCTG TGGGTGTTGATAACTTCTCTTTACTGGCTATTCCGTTCTTTATTTTGGCGGGGAATATTATGAATCAGGGGGGAATTGCT ACCCGGTTGATTAATCTGGCGAAAGTTATGGGGGGACGCTTGCCCGGTTCATTGGTTCACGTCAATATTATGGCGAATAT GTTTTTTGGTGCGATTTCGGGTTCAGCGGTGGCATCCGCTGCGGCTGTCGGCGGAACGATGGCACCAATGCAGAAAAAAG AGGGTTATGAACCGGAGTATTCTGCTGCTGTAAACATTGCTTCTTGCCCTGCTGGTTTGTTGATCCCACCAAGTAATACT TTGATTGTTTATTCTCTGGTTTCCGGTGGTACATCAATTGCGGCGCTATTTCTGGCAGGTTATATTCCAGGCATTCTGAT GGGGGTATCTCTGATGATAGTGTCGGCAATTATTGCCAAACGCCGTGGCTATCCGGTATCACCAAGACCCACATGGAACG AGTTTTTTATCACTTTGGTTCGCGCATTGCCTTCCCTGATGCTGATTGTGGTCGTTATGGGCGGTATCATTGCCGGTATT TTTACCGCGACAGAAGCTTCTGCAATTGCCGTATTGTACAGCTTTGTATTGGCAGTACTGATTTATCGCGAAGTCAGTAT CATCAAGCTGCCGAAAATCATTTTGGATTCTGCTGTGACCACTTCCATTGTTCTGCTGCTGATTGGTGCATCAATGGGAA TGTCTTGGGCAATGGCAAATGCTGATCTGCCCTATCTGATTGCTGATGCATTGATGGTAGTTTCGGAAAACCCGCTGGTT ATTCTGCTGGTCATTAATATCATTTTATTGCTGGTCGGAACCTTTATGGATATGACCCCGGCGATTCTGATTTTTACGCC GATTTTTCTGCCTGTAGCACAGAGTATGGGAATTGATCCGGTACACTTCGGCATCATTATGACTTTTAACTTGGCTATTG GTATCTGTACGCCTCCGGTAGGTAGTGCGCTATTTGTTGGCTGTTCCATTGGTGAGGTCAGCATTAATAAGGTGTTGAAG CCTTTGGTACCAATGTATTGCGCCTTAATTATTGCCCTGATGTTGGTGACTTTTATGCCTCAGTTGAGTTTGTGGTTGCC TCAAATGTTACTGAATTACTGA Protein sequence : MDWQVVLVLFGSFAILLALGIPVSFAISLSSLLAIMMTLPIEAAVTVVAQRMAVGVDNFSLLAIPFFILAGNIMNQGGIA TRLINLAKVMGGRLPGSLVHVNIMANMFFGAISGSAVASAAAVGGTMAPMQKKEGYEPEYSAAVNIASCPAGLLIPPSNT LIVYSLVSGGTSIAALFLAGYIPGILMGVSLMIVSAIIAKRRGYPVSPRPTWNEFFITLVRALPSLMLIVVVMGGIIAGI FTATEASAIAVLYSFVLAVLIYREVSIIKLPKIILDSAVTTSIVLLLIGASMGMSWAMANADLPYLIADALMVVSENPLV ILLVINIILLLVGTFMDMTPAILIFTPIFLPVAQSMGIDPVHFGIIMTFNLAIGICTPPVGSALFVGCSIGEVSINKVLK PLVPMYCALIIALMLVTFMPQLSLWLPQMLLNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-56 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-56 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ygiK | YP_003038963.1 | similar to dicarboxylate transport system | VFG1110 | Protein | 1e-56 | 41 |
