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Name : lysS (PAU_01226) Accession : YP_003040063.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1398275 - 1399789 bp Length : 1515 bp Strand : + Note : - DNA sequence : ATGTCACAACAACAACAGGGTGCAGAACAGGCTCCCGATTTAAATAATGAATTGCAAACCCGCCGTGAAAAACTCGCGGC TTTACGTGAAAATGGCATTGCTTTCCCAAATGATTTCCATCGTGAAAACATGTCAGAAGAATTGCACGCAAAATATGACG ATAAGACTCAGGAAGAGCTGGAAGCACTGAATATTGAAGTGACAGTTGGTGGTCGTATGATGACTCGTCGCATCATGGGT AAGGCTTCTTTTGTCACGCTACAGGATGCGGGCGGTCGTATTCAGCTATACGTTGCCCGTGATGATTTACCGGAAGGTAT TTATAACGAACAGTTTAAAAAATGGGACTTGGGAGACATTCTAGGTGCTCGTGGCAAGTTGTTTAAAACTAAAACCGGTG AGCTTTCCATTCATTGTACTGAGCTGCGCCTGCTGACTAAGGCTCTGCGTCCATTGCCAGATAAATTTCATGGTTTGGCA GATCAGGAAACCCGTTACCGCCAGCGCTATCTGGATTTGATCGCTAATGAAGAATCGCGCAAGACTTTCCAGATTCGTTC TCAGGTCTTGTCCGTGATGCGTAACTTTATAATCAGCAAAGGCTTTATGGAAGTGGAAACACCGATGATGCAGGTGATTC CTGGTGGTGCGGCGGCACGTCCGTTTGTCACTCATCACAATGCGTTGGATATTGATATGTATCTGCGTATTGCGCCGGAG CTTTACCTGAAACGTTTGGTGGTTGGTGGTTTTGAGCGTGTGTTTGAAATTAACCGTAACTTCCGTAACGAAGGTGTATC TCCACGACATAACCCTGAGTTCACGATGTTAGAACTCTATATGGCTTATGCTGATTACAAAGATCTGATTGTACTGATCG AAGAGTTATTCCGTACCCTGGCTCAGAATGTTTTGGGGGATACACGGGTTAAATATGGTGAGCAGGAATTCGATTTCGGT AAACCATTTGCCCAAATGAGCATGAAAGAAGCTATCTGTAAATATCGTCCTGAAACTAACATGGCTGATTTGGATGATAT GGATAAAGCGGTGGCTATCGCTGAATCTCTTGGTATTGACGTGGAAAAAGGTTGGGGCCTTGGCCGCGTTCAGTGTGAGA TTTTCGAAGAAACGGCTGAAAGCCGCTTGATTCAACCAACATTTATCACTGAATATCCGGCAGAAGTTTCTCCGCTGGCG CGTCGTAATAATGACAATCCGTTTATCACTGATCGTTTTGAATTCTTTATTGGTGGACGTGAAATTGGTAACGGTTTCTC AGAATTGAATGATGCGGAAGATCAGGCAGAACGCTTTGCTGAGCAGGTTCGTCAGAAAGATGAAGGTGATGACGAAGCGA TGTTCTACGATGAAGATTATATAACGGCTTTGGAACATGGCATGCCACCAACCGCAGGTTTGGGTATTGGTATTGACCGC ATGGTAATGCTGTTTACTAACAGCCATACCATTCGTGACGTTATTTTATTCCCGGCAATGCGTCCACAGAAATAA Protein sequence : MSQQQQGAEQAPDLNNELQTRREKLAALRENGIAFPNDFHRENMSEELHAKYDDKTQEELEALNIEVTVGGRMMTRRIMG KASFVTLQDAGGRIQLYVARDDLPEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLA DQETRYRQRYLDLIANEESRKTFQIRSQVLSVMRNFIISKGFMEVETPMMQVIPGGAAARPFVTHHNALDIDMYLRIAPE LYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMLELYMAYADYKDLIVLIEELFRTLAQNVLGDTRVKYGEQEFDFG KPFAQMSMKEAICKYRPETNMADLDDMDKAVAIAESLGIDVEKGWGLGRVQCEIFEETAESRLIQPTFITEYPAEVSPLA RRNNDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKDEGDDEAMFYDEDYITALEHGMPPTAGLGIGIDR MVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-168 | 66 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-91 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003040063.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-168 | 66 |
