Gene Information

Name : aldB (PAU_01081)
Accession : YP_003039918.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase b (lactaldehyde dehydrogenase)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 1225167 - 1226651 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGATTACATGATATTGCTGAAGAGATGTTACCCGTTAAATCCTACAAAATGCTTATCGGTGGACAATGGGTAGA
TAGTGTATCCAAAGAAACAACCAAAAGTTATAACCCGACGACGGGAGAATTACTGACTGAATATGCATCTGGTAATGCCA
AAGATGTTGATCTTGCTGTCAGTGCCGCGAAAAAAGCCTTCTCTGTATGGAGTCAAACCTCCCCAATAGAAAGACAATCA
GCTTTGCTGAAAATTGCTGACTTACTGGAAGCAGAACTAGAACGTTTTGCCATGCTTGAATCACTGGATAACGGTAAACC
ATTACATGAATCCCGGGATATGGATCTGCCCGCCAGCATTGACCAGTTCCGCTACTTTGCGGGAGTGATCCGTGCCCATT
CCGATGAAGCTTCAGTTCTAGATACCAATACACTTAGCTTGGTGATCCGTGAGCCTATTGGTGTTGTCGGACAAGTAATT
CCCTGGAATTTCCCGCTACTGATGGCGGCATGGAAACTGGCTCCTGCTCTCGCAGCAGGTAACACGATTGTTATCAATCC
TGCAACATTGACACCAATCACACTGCTTGAATTAGGTCGGATATTGAATCAAGTCCTGCCAGCTGGGGTGGTCAACATTG
TTACAGGTCGTGGTGCAGTAGTAGGTCAAGCGATTCTGGATCATAAAGATGTCGAGAAAGTGGCCTTCACAGGTTCCACC
GGAGTTGGCTATACCGTAGCCGAAGCCGCTGCTAAAAAGCTTATCCCTGCAACACTGGAACTTGGCGGTAAATCGGCCAA
TATTATCTTCCCTGATGCCAATATGAAGAAAGCAGTAAAATATGCTGCCAAAGCCATTCTGTTGAATCAAGGGCAGGCAT
GTGAATCAGGTTCGCGGTTATTCCTGCATAAAGATATTCATGATGAATTCCTGAAATCCCTGAAAGTAGAATTTGAATCT
GTCCGGGTTGGTGATCCATTGGAAAAAGAAACACAGATGGGAAGCCAAATCAGCCAGGAACAAATGGAAAAAATTCTCTC
ATATGTCGATATTGCGAAAAAAGAGGGCGCGACTATCTTGACCGGTGGCAAACGGATTACTGGTGAAGGTTATGATGATG
GCTTCTTTATTCAACCAACCATTATTATCAATGCGACTAATGAAATGCGAGTCGCACGCGAAGAAATCTTTGGCCCTGTA
TTAACAGTCATTCCATTCAGCACAGAAGAAGACGTGATCAACATGGCAAATGATTCTGATTATGGGCTTGGTGGTGCAGT
TTGGACACAGGATATCGACCGAGCATTACGTGTTTCCAAAGCTGTCAGAACTGGCCGCATGTGGATCAATACTTACCATG
AACTACCCGCCCATGCACCATTCGGCGGTTACAAAAAATCTGGCCTTGGAAGAGAAACACACAAAATGATGTTAGATGCT
TATACTCAGGTCAAAAACATCTACATTAAAACTAGTGAAAAATAA

Protein sequence :
MKRLHDIAEEMLPVKSYKMLIGGQWVDSVSKETTKSYNPTTGELLTEYASGNAKDVDLAVSAAKKAFSVWSQTSPIERQS
ALLKIADLLEAELERFAMLESLDNGKPLHESRDMDLPASIDQFRYFAGVIRAHSDEASVLDTNTLSLVIREPIGVVGQVI
PWNFPLLMAAWKLAPALAAGNTIVINPATLTPITLLELGRILNQVLPAGVVNIVTGRGAVVGQAILDHKDVEKVAFTGST
GVGYTVAEAAAKKLIPATLELGGKSANIIFPDANMKKAVKYAAKAILLNQGQACESGSRLFLHKDIHDEFLKSLKVEFES
VRVGDPLEKETQMGSQISQEQMEKILSYVDIAKKEGATILTGGKRITGEGYDDGFFIQPTIIINATNEMRVAREEIFGPV
LTVIPFSTEEDVINMANDSDYGLGGAVWTQDIDRALRVSKAVRTGRMWINTYHELPAHAPFGGYKKSGLGRETHKMMLDA
YTQVKNIYIKTSEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-99 48
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-102 48
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_003039918.1 aldehyde dehydrogenase b (lactaldehyde dehydrogenase) VFG0082 Protein 2e-99 48