Gene Information

Name : PAU_01062 (PAU_01062)
Accession : YP_003039899.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5613
EC number : -
Position : 1207080 - 1208258 bp
Length : 1179 bp
Strand : +
Note : conserved hypothetical protein

DNA sequence : 
ATGAATCTAATAGCAAATGATCCACTACGGGGCGGTTTTCCAGTTGGTGATATCCCTGCGATTACACCTTTTAAAAAGGA
TGATCACTTTACACCTAGCCAAGCGGGTAATATACAACCTAACAATATAGTCGCGACATCAGGAGTGGTATTACCGCAAC
CATTGTCAGTCAGTAATACTCGTCTTGATGTACAACAACAAAAGGAAGTAGATCATCTGCTCGAATCAATTAGACAAAAG
ACCGAGCAAGCAACGGGGCTGATAGCAGAATTGGCAGTAAAACTGACAGAAACTTCGCGGTTGGCCTCTCTGGCGATATC
CTCATTTGAGGAAATAGAAATTGAGCTGGGCAAACTGACCAGTGAGCTTGAACGTAATCAGACGAATCTTAAGCTTCAGG
ATATTCATCGGGCGCGTCAGCAAAGTTTACAGAAAATGGATGAGAATCAGCAGAAGATCAAAGAAGCAGAAAATTCTGCC
AAAGAGGCGCAGAAATCTGGGTTGTTCTCTAAAATCTTTGGGTGGCTTAGTGCGATTGCCTCAATTGTGGTTGGGGCAAT
CATGGTTGCTACCGGGGTTGGCGCAGTAGCAGGCGCTTTGCTGATTGCTGGAGGAGTAATGGGTGTGGTTTCTCAGGGAT
TACAACAGGCGGCTCAAGACGGTTTAATTAGCAAGGAAACTATGAAATGGTTGGGGCCAGTTATAACCGCGATTGAGGTT
ACAATGGCTGTGGCTGCGGCGGCAGTCAGTTTTGGTGGTTCCGCCGCAGGTTTGATAGCTAAAATGGGCGCTAAGATTGG
CGGTAAAGTGGCTGAAGTGACGGCTAGGGTGGCAACAAAGGCGGTGGAGTTTTCTGCAAAAATGGCTGGTACAGCAGCTA
ATACCGCGGCTCGAGGGATGAAGGTGGTTACACAGGTGAGTGATATGGCAGTTGATCTTGCTAATGGTGCTGCTCAAACT
GCCAATGCGGCCTTCCAGAGTAAAGCGGCTAACAGACAGGCCGATGTACAGCTTTCACGTAGCGAATTGACCACATTTCA
GGCTCTTATGGATAAGCTCAAAGGGGACTTGTTCCAAATGGTGGAGTCTTTCCAACATGTAATGGAAATGATTTTACAGA
TGCTTAATGCCAAGGGAGATATGATAAATAACCTTGCCAGCCGACCACAGGAAATTTAG

Protein sequence : 
MNLIANDPLRGGFPVGDIPAITPFKKDDHFTPSQAGNIQPNNIVATSGVVLPQPLSVSNTRLDVQQQKEVDHLLESIRQK
TEQATGLIAELAVKLTETSRLASLAISSFEEIEIELGKLTSELERNQTNLKLQDIHRARQQSLQKMDENQQKIKEAENSA
KEAQKSGLFSKIFGWLSAIASIVVGAIMVATGVGAVAGALLIAGGVMGVVSQGLQQAAQDGLISKETMKWLGPVITAIEV
TMAVAAAAVSFGGSAAGLIAKMGAKIGGKVAEVTARVATKAVEFSAKMAGTAANTAARGMKVVTQVSDMAVDLANGAAQT
ANAAFQSKAANRQADVQLSRSELTTFQALMDKLKGDLFQMVESFQHVMEMILQMLNAKGDMINNLASRPQEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopB AAO18055.1 LopB Virulence TTSS locus Protein 2e-81 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAU_01062 YP_003039899.1 hypothetical protein VFG0203 Protein 6e-52 54
PAU_01062 YP_003039899.1 hypothetical protein VFG0379 Protein 1e-44 41