Gene Information

Name : pcrR (PAU_01058)
Accession : YP_003039895.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : similar to transcription regulator proteins lcrr and pcrr
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1204860 - 1205288 bp
Length : 429 bp
Strand : +
Note : -

DNA sequence : 
ATGAATCATGATCCGCTGACGTCTTGGTTTGAGGAACGGGGTTATCCAGTGCAGCTTCATTGTATGGGAAGTAGTTCAAT
TCCTCTAGGTTGGCGTGTGTGGTGTGAAGGCTGTGAAATTGCCTGGCGCTACGATGCTCCGCGAGTTTGGATCATAATGT
TACGTCGTACTCAGCAACGGCGGGGACTTGCTAATCCATTTGCGCCTCTTTATCTGTTGGCTACAGCCGCTATGACAGTG
CTTGGGCCGGGTAGCCGGCTTTATGGTCAAGTTAATACGCTAGTTGACTCTCCTCTTAATGATGAACGTTTAACCCGATT
TTATCACCGCTGGACAGGTGCGAGTGAAGTAGCGCCTGGCTGGTTCGAGTTAGAAGCCAGTTGCGTAATATCGTTACATC
AAATGAGAAAACAACAAAAAAAAGTCTAA

Protein sequence : 
MNHDPLTSWFEERGYPVQLHCMGSSSIPLGWRVWCEGCEIAWRYDAPRVWIIMLRRTQQRRGLANPFAPLYLLATAAMTV
LGPGSRLYGQVNTLVDSPLNDERLTRFYHRWTGASEVAPGWFELEASCVISLHQMRKQQKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssR AAO18051.1 LssR Virulence TTSS locus Protein 9e-60 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcrR YP_003039895.1 similar to transcription regulator proteins lcrr and pcrr VFG0199 Protein 5e-40 60
pcrR YP_003039895.1 similar to transcription regulator proteins lcrr and pcrr VFG0383 Protein 2e-30 47