Gene Information

Name : sctX (PAU_01055)
Accession : YP_003039892.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion protein sctx
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1202046 - 1202411 bp
Length : 366 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTAGAATTGCTTCCGCCCATATAGGAATTGAGCAACTGACGGCGATCAGCCAGGAAGAGATAGGGATTGGTTTGCC
CGATCGCTATGTATTATTGCCTGATGGTCAATCTGTTGAGACTCACTCAGCACGTCTTTATCCGGCTAACAAAGCCGATC
AGACTTTATTGGCCTTTGCCTGCCCAAAAGATGGGTTTCATTCTCTTTTACGCCCGTATGACTTCCGTCAGGCTGTCAGT
AGCCTGCATGAGACTTTACAACAAGGTGATGACATTAGAGTACGGAATGCCGTTTCCTTGTTGGAAAATATGAATCAAGA
TGAACAGTTGTTGCAGATGGCTCTGCACCTGTTACACAAGGTATGA

Protein sequence : 
MSRIASAHIGIEQLTAISQEEIGIGLPDRYVLLPDGQSVETHSARLYPANKADQTLLAFACPKDGFHSLLRPYDFRQAVS
SLHETLQQGDDIRVRNAVSLLENMNQDEQLLQMALHLLHKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssB AAO18048.1 LssB Virulence TTSS locus Protein 1e-46 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctX YP_003039892.1 type iii secretion protein sctx VFG0196 Protein 2e-23 50
sctX YP_003039892.1 type iii secretion protein sctx VFG0386 Protein 4e-24 46