Gene Information

Name : sctW (PAU_01053)
Accession : YP_003039890.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion control protein sctw
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1200542 - 1201681 bp
Length : 1140 bp
Strand : +
Note : -

DNA sequence : 
ATGGATATTATCCAGAATCATCTTCATTCGGTGACTTTGCCAGAATCCGGTGCCGAAATTACAGCGCAACAGGAGCAGGC
TAAAATCGGTCAGTTTCAGGGAGAGAAAGTGGTACTGGTTGCTGCATCCCAGTCTTTAGCTGACGCGGCTGAAGAGATGA
CCTTTGCATTTTCGGAACGTAAGGATATGCCATTATCCAAACGTAAAGTTAGCGATGGGCATGCTAGGGTGCGGGAAATT
GAGGCGCTAGTGAGTGAGTACTTACAGAAAGTGCCGGATCTGGAGCGTCAACAAAAGATTAAGGCATTGATCTCTCACTT
AAATAGCGGCCAGTTGACCAATATCTCGCAGTTACAGGCTTATCTGGAAAGTTTCTCTGGAGAAGTGAGTGAACAATTCT
ATGCGTTGAGTCAGGCCCGTGATGCGCTAGCAGGCAGGCCAGAGGCCCGTGCCATGTTGGCATTGATTGAGCAGGAGTTG
TCACGTTTAGCACAAGAGCAGGGAATCGCTATCGAGTTGGGGGCTCGCATTACGCCTGATGCCACGGTAGCAGCCAGAAA
TGGGGTTGGCAATTTGCAGGCATTACGTAACATTTATCGTGATGCTGTTATGGATTATCAAGGGTTGTCAGCGGCTTGGC
GAGATATCCAATCAAATTTTAAGAACAGTCCCTTGAAGGAAGTAACAGGATTCATCATGAAAGCTTTGGTTGCTGATCTG
GAAAGCCAACCGCGAAATATTGAGTCTGCTAAGCTGCAATGTGTTATGGATGATATGAAGAAGCTACGTTTGGTTAACAC
TGTGTCGGCTAAGGTTGAGTTGTTATATAAAAGCGTAGTGAAGGAAGAAAGCAAGTCATACTGGCCTTCTGACCTTATGG
GGGATGTTATTTCCCTGATTGAGAAACGCTGGGCTAATGTGCGGGATGTTGAAATGCTCGGTAATGCTTTGGAATTGCAG
GATAGTGAAACTCAAATTTATTTCTTCCGGGAGTTGAAACAATTAATTCGATTGATTCCGGTGGAAGTGTTTAGTGATGA
GGAGCAGCGCCAAAATCTGCTTAATTCCTGTCAACTGGTGCTTGATGCAGCAATTGAGAAAGAAGAAGACGAACTGTGGT
CAGGAGAAGGAACATCATGA

Protein sequence : 
MDIIQNHLHSVTLPESGAEITAQQEQAKIGQFQGEKVVLVAASQSLADAAEEMTFAFSERKDMPLSKRKVSDGHARVREI
EALVSEYLQKVPDLERQQKIKALISHLNSGQLTNISQLQAYLESFSGEVSEQFYALSQARDALAGRPEARAMLALIEQEL
SRLAQEQGIAIELGARITPDATVAARNGVGNLQALRNIYRDAVMDYQGLSAAWRDIQSNFKNSPLKEVTGFIMKALVADL
ESQPRNIESAKLQCVMDDMKKLRLVNTVSAKVELLYKSVVKEESKSYWPSDLMGDVISLIEKRWANVRDVEMLGNALELQ
DSETQIYFFRELKQLIRLIPVEVFSDEEQRQNLLNSCQLVLDAAIEKEEDELWSGEGTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 9e-112 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctW YP_003039890.1 type iii secretion control protein sctw VFG0193 Protein 1e-72 56